Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RAPGEF3O95398 Y_RNA.215-201ENST00000364204 112 ntBASIC2.12□□□□□ -2.07
RAPGEF3O95398 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.12□□□□□ -2.07
RAPGEF3O95398 RNA5SP127-201ENST00000411051 133 ntBASIC2.12□□□□□ -2.07
RAPGEF3O95398 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.12□□□□□ -2.07
RAPGEF3O95398 SUMO2P16-201ENST00000519475 264 ntBASIC2.12□□□□□ -2.07
RAPGEF3O95398 AC112693.2-201ENST00000556538 232 ntBASIC2.12□□□□□ -2.07
RAPGEF3O95398 MIR3658-201ENST00000636291 56 ntBASIC2.12□□□□□ -2.07
RAPGEF3O95398 RNU4-11P-201ENST00000365287 132 ntBASIC2.11□□□□□ -2.07
RAPGEF3O95398 SNORA2.2-201ENST00000365473 135 ntBASIC2.11□□□□□ -2.07
RAPGEF3O95398 RNU6-125P-201ENST00000384505 107 ntBASIC2.11□□□□□ -2.07
RAPGEF3O95398 MIR513A1-201ENST00000385138 129 ntBASIC2.11□□□□□ -2.07
RAPGEF3O95398 MIR624-201ENST00000385217 97 ntBASIC2.11□□□□□ -2.07
RAPGEF3O95398 AC004223.1-201ENST00000479840 271 ntBASIC2.11□□□□□ -2.07
RAPGEF3O95398 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.11□□□□□ -2.07
RAPGEF3O95398 RNU6-818P-201ENST00000364837 108 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 SNORA1-201ENST00000384107 130 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 Y_RNA.488-201ENST00000384403 102 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 MIR653-201ENST00000385279 96 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 MIR513C-201ENST00000401352 84 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 SNORA18.4-201ENST00000516440 124 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 AC015688.6-201ENST00000577737 104 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 MIR548X2-201ENST00000579776 100 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 MIR3133-201ENST00000583157 78 ntBASIC2.1□□□□□ -2.07
RAPGEF3O95398 U8.1-201ENST00000362843 134 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 Y_RNA.343-201ENST00000365354 112 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 RNA5SP259-201ENST00000365541 109 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 MIR526A1-201ENST00000384897 85 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.09□□□□□ -2.07
RAPGEF3O95398 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.09□□□□□ -2.07
RAPGEF3O95398 snoU13.9-201ENST00000458927 103 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 AC008834.1-201ENST00000511612 175 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 RNU4-57P-201ENST00000515980 135 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 RNU6-322P-201ENST00000516010 103 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 AC090049.2-201ENST00000550377 109 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 MIR3129-201ENST00000581095 76 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 MIR3660-201ENST00000584845 100 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.07
RAPGEF3O95398 Y_RNA.37-201ENST00000362606 108 ntBASIC2.08□□□□□ -2.08
RAPGEF3O95398 SNORA1.2-201ENST00000365189 134 ntBASIC2.08□□□□□ -2.08
RAPGEF3O95398 MIR516B2-201ENST00000385190 85 ntBASIC2.08□□□□□ -2.08
RAPGEF3O95398 RNU6-588P-201ENST00000410281 105 ntBASIC2.08□□□□□ -2.08
RAPGEF3O95398 AF228730.3-201ENST00000436691 102 ntBASIC2.08□□□□□ -2.08
RAPGEF3O95398 AC024614.2-201ENST00000577584 372 ntBASIC2.08□□□□□ -2.08
RAPGEF3O95398 ICE2P2-201ENST00000483823 2787 ntBASIC2.08□□□□□ -2.08
RAPGEF3O95398 RNU6-1082P-201ENST00000364574 107 ntBASIC2.07□□□□□ -2.08
RAPGEF3O95398 SNORD50.2-201ENST00000365465 70 ntBASIC2.07□□□□□ -2.08
RAPGEF3O95398 RNU6-1189P-201ENST00000383958 107 ntBASIC2.07□□□□□ -2.08
RAPGEF3O95398 SNORD77.3-201ENST00000391113 65 ntBASIC2.07□□□□□ -2.08
RAPGEF3O95398 AL392103.1-201ENST00000447000 198 ntBASIC2.07□□□□□ -2.08
RAPGEF3O95398 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.07□□□□□ -2.08
RAPGEF3O95398 SNORD33-201ENST00000362761 85 ntBASIC2.06□□□□□ -2.08
RAPGEF3O95398 U8.17-201ENST00000391292 132 ntBASIC2.06□□□□□ -2.08
RAPGEF3O95398 AC131055.1-201ENST00000584626 316 ntBASIC2.06□□□□□ -2.08
RAPGEF3O95398 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.06□□□□□ -2.08
RAPGEF3O95398 RNU6-774P-201ENST00000363238 107 ntBASIC2.05□□□□□ -2.08
RAPGEF3O95398 MIR934-201ENST00000401241 83 ntBASIC2.05□□□□□ -2.08
RAPGEF3O95398 RNU6-917P-201ENST00000516294 104 ntBASIC2.05□□□□□ -2.08
RAPGEF3O95398 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.05□□□□□ -2.08
RAPGEF3O95398 AP003484.1-201ENST00000530974 250 ntBASIC2.05□□□□□ -2.08
RAPGEF3O95398 MIR5197-201ENST00000583721 112 ntBASIC2.05□□□□□ -2.08
RAPGEF3O95398 AL513534.2-201ENST00000603836 250 ntBASIC2.05□□□□□ -2.08
RAPGEF3O95398 AC106754.2-201ENST00000623006 233 ntBASIC2.05□□□□□ -2.08
RAPGEF3O95398 MIR569-201ENST00000385228 96 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 SNORA40.5-201ENST00000391061 128 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 Y_RNA.584-201ENST00000391090 114 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 RNU6-938P-201ENST00000411285 103 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 RNU7-197P-201ENST00000458836 62 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 AC107297.1-201ENST00000459991 176 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 RNU6-346P-201ENST00000516288 111 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 SNORA74.3-201ENST00000517108 154 ntBASIC2.04□□□□□ -2.08
RAPGEF3O95398 SNORD115-34-201ENST00000362441 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-12-201ENST00000362583 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-29-201ENST00000362834 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-9-201ENST00000362912 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-21-201ENST00000362963 81 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-14-201ENST00000363090 81 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-13-201ENST00000363358 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-41-201ENST00000363608 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-11-201ENST00000363616 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-5-201ENST00000363633 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-39-201ENST00000363694 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-4-201ENST00000363810 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-16-201ENST00000363887 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-6-201ENST00000363942 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-42-201ENST00000364273 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 Y_RNA.251-201ENST00000364551 99 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-15-201ENST00000364809 81 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-1-201ENST00000364961 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-26-201ENST00000365067 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-10-201ENST00000365073 81 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-43-201ENST00000365503 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-36-201ENST00000365629 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 Y_RNA.497-201ENST00000384447 98 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORA40.6-201ENST00000391153 128 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 AL451046.2-201ENST00000403074 277 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 RPL31P63-201ENST00000422565 375 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD123-201ENST00000459473 70 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 SNORD115-40-201ENST00000606510 82 ntBASIC2.03□□□□□ -2.08
RAPGEF3O95398 MIR302D-201ENST00000362275 68 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms