Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SNORD2.1-201ENST00000458762 69 ntBASIC0.86□□□□□ -2.27
MBD4O95243 RNU6-1299P-201ENST00000516316 100 ntBASIC0.86□□□□□ -2.27
MBD4O95243 RNU7-53P-201ENST00000516705 60 ntBASIC0.86□□□□□ -2.27
MBD4O95243 AP003484.1-201ENST00000530974 250 ntBASIC0.86□□□□□ -2.27
MBD4O95243 AC022709.1-201ENST00000615967 87 ntBASIC0.86□□□□□ -2.27
MBD4O95243 MIR6734-201ENST00000621166 68 ntBASIC0.86□□□□□ -2.27
MBD4O95243 MIR6835-201ENST00000621552 64 ntBASIC0.86□□□□□ -2.27
MBD4O95243 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
MBD4O95243 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
MBD4O95243 HSBP1P2-201ENST00000299671 229 ntBASIC0.85□□□□□ -2.27
MBD4O95243 SNORA63-201ENST00000363450 132 ntBASIC0.85□□□□□ -2.27
MBD4O95243 RNU6-740P-201ENST00000364734 105 ntBASIC0.85□□□□□ -2.27
MBD4O95243 SNORD61-201ENST00000384252 73 ntBASIC0.85□□□□□ -2.27
MBD4O95243 SNORA27-201ENST00000384323 126 ntBASIC0.85□□□□□ -2.27
MBD4O95243 Y_RNA.572-201ENST00000384757 98 ntBASIC0.85□□□□□ -2.27
MBD4O95243 MIR508-201ENST00000384857 115 ntBASIC0.85□□□□□ -2.27
MBD4O95243 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
MBD4O95243 MT-TW-201ENST00000387382 68 ntBASIC0.85□□□□□ -2.27
MBD4O95243 MIR1302-6-201ENST00000408466 90 ntBASIC0.85□□□□□ -2.27
MBD4O95243 RNU7-73P-201ENST00000458743 63 ntBASIC0.85□□□□□ -2.27
MBD4O95243 SNORA18.4-201ENST00000516440 124 ntBASIC0.85□□□□□ -2.27
MBD4O95243 RNU6-958P-201ENST00000516995 106 ntBASIC0.85□□□□□ -2.27
MBD4O95243 MIR5000-201ENST00000577717 103 ntBASIC0.85□□□□□ -2.27
MBD4O95243 Y_RNA.812-201ENST00000610788 101 ntBASIC0.85□□□□□ -2.27
MBD4O95243 Y_RNA.784-201ENST00000613803 101 ntBASIC0.85□□□□□ -2.27
MBD4O95243 Y_RNA.787-201ENST00000616522 101 ntBASIC0.85□□□□□ -2.27
MBD4O95243 Y_RNA.780-201ENST00000617336 101 ntBASIC0.85□□□□□ -2.27
MBD4O95243 Y_RNA.801-201ENST00000619005 101 ntBASIC0.85□□□□□ -2.27
MBD4O95243 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
MBD4O95243 Y_RNA.483-201ENST00000384380 101 ntBASIC0.84□□□□□ -2.27
MBD4O95243 Y_RNA.494-201ENST00000384432 111 ntBASIC0.84□□□□□ -2.27
MBD4O95243 MIR548A2-201ENST00000384956 97 ntBASIC0.84□□□□□ -2.27
MBD4O95243 MIR548F4-201ENST00000408515 105 ntBASIC0.84□□□□□ -2.27
MBD4O95243 RNU2-70P-201ENST00000410718 179 ntBASIC0.84□□□□□ -2.27
MBD4O95243 RNU6-651P-201ENST00000411040 105 ntBASIC0.84□□□□□ -2.27
MBD4O95243 RNA5SP153-201ENST00000516498 76 ntBASIC0.84□□□□□ -2.27
MBD4O95243 RNU6-1270P-201ENST00000517128 108 ntBASIC0.84□□□□□ -2.27
MBD4O95243 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.84□□□□□ -2.27
MBD4O95243 RNU6-42P-201ENST00000384165 107 ntBASIC0.83□□□□□ -2.28
MBD4O95243 RNU6-125P-201ENST00000384505 107 ntBASIC0.83□□□□□ -2.28
MBD4O95243 Y_RNA.574-201ENST00000384766 95 ntBASIC0.83□□□□□ -2.28
MBD4O95243 SNORD105-201ENST00000386910 85 ntBASIC0.83□□□□□ -2.28
MBD4O95243 Y_RNA.590-201ENST00000410140 107 ntBASIC0.83□□□□□ -2.28
MBD4O95243 RNU6-938P-201ENST00000411285 103 ntBASIC0.83□□□□□ -2.28
MBD4O95243 RPS26P5-201ENST00000418544 335 ntBASIC0.83□□□□□ -2.28
MBD4O95243 snoU13.18-201ENST00000459483 104 ntBASIC0.83□□□□□ -2.28
MBD4O95243 RPS29P24-201ENST00000486345 171 ntBASIC0.83□□□□□ -2.28
MBD4O95243 AL442663.2-201ENST00000554385 511 ntBASIC0.83□□□□□ -2.28
MBD4O95243 AC133485.1-201ENST00000567176 124 ntBASIC0.83□□□□□ -2.28
MBD4O95243 AC138907.6-201ENST00000568401 126 ntBASIC0.83□□□□□ -2.28
MBD4O95243 MIR8062-201ENST00000621515 85 ntBASIC0.83□□□□□ -2.28
MBD4O95243 SNORD45.3-201ENST00000363836 72 ntBASIC0.82□□□□□ -2.28
MBD4O95243 Y_RNA.432-201ENST00000384087 111 ntBASIC0.82□□□□□ -2.28
MBD4O95243 RNU6-1011P-201ENST00000384668 107 ntBASIC0.82□□□□□ -2.28
MBD4O95243 RNU6-205P-201ENST00000390858 107 ntBASIC0.82□□□□□ -2.28
MBD4O95243 Y_RNA.679-201ENST00000516416 91 ntBASIC0.82□□□□□ -2.28
MBD4O95243 AC008737.2-201ENST00000599446 118 ntBASIC0.82□□□□□ -2.28
MBD4O95243 Y_RNA.354-201ENST00000365448 111 ntBASIC0.81□□□□□ -2.28
MBD4O95243 Y_RNA.410-201ENST00000383992 113 ntBASIC0.81□□□□□ -2.28
MBD4O95243 RNU6-484P-201ENST00000384016 107 ntBASIC0.81□□□□□ -2.28
MBD4O95243 Y_RNA.461-201ENST00000384263 103 ntBASIC0.81□□□□□ -2.28
MBD4O95243 RNU6-472P-201ENST00000384299 107 ntBASIC0.81□□□□□ -2.28
MBD4O95243 MIR616-201ENST00000385293 97 ntBASIC0.81□□□□□ -2.28
MBD4O95243 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.81□□□□□ -2.28
MBD4O95243 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.81□□□□□ -2.28
MBD4O95243 COX6CP6-201ENST00000490840 228 ntBASIC0.81□□□□□ -2.28
MBD4O95243 AC004812.1-201ENST00000540773 146 ntBASIC0.81□□□□□ -2.28
MBD4O95243 Y_RNA.66-201ENST00000362862 102 ntBASIC0.8□□□□□ -2.28
MBD4O95243 Y_RNA.145-201ENST00000363527 102 ntBASIC0.8□□□□□ -2.28
MBD4O95243 Y_RNA.634-201ENST00000364811 113 ntBASIC0.8□□□□□ -2.28
MBD4O95243 RNU6-738P-201ENST00000384531 106 ntBASIC0.8□□□□□ -2.28
MBD4O95243 SNORD38B-201ENST00000384690 67 ntBASIC0.8□□□□□ -2.28
MBD4O95243 RNU6-1228P-201ENST00000391014 107 ntBASIC0.8□□□□□ -2.28
MBD4O95243 RNU1-119P-201ENST00000391122 165 ntBASIC0.8□□□□□ -2.28
MBD4O95243 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
MBD4O95243 RNA5SP436-201ENST00000516020 115 ntBASIC0.8□□□□□ -2.28
MBD4O95243 SNORD36C-201ENST00000516733 66 ntBASIC0.8□□□□□ -2.28
MBD4O95243 AL117187.1-201ENST00000555482 181 ntBASIC0.8□□□□□ -2.28
MBD4O95243 AC097639.2-201ENST00000603159 172 ntBASIC0.8□□□□□ -2.28
MBD4O95243 SNORD38B-202ENST00000625943 69 ntBASIC0.8□□□□□ -2.28
MBD4O95243 Y_RNA.118-201ENST00000363300 101 ntBASIC0.79□□□□□ -2.28
MBD4O95243 Y_RNA.176-201ENST00000363815 109 ntBASIC0.79□□□□□ -2.28
MBD4O95243 Y_RNA.304-201ENST00000365011 112 ntBASIC0.79□□□□□ -2.28
MBD4O95243 Y_RNA.396-201ENST00000383949 103 ntBASIC0.79□□□□□ -2.28
MBD4O95243 Y_RNA.518-201ENST00000384552 113 ntBASIC0.79□□□□□ -2.28
MBD4O95243 RNU7-62P-201ENST00000458856 62 ntBASIC0.79□□□□□ -2.28
MBD4O95243 RNU7-96P-201ENST00000459535 64 ntBASIC0.79□□□□□ -2.28
MBD4O95243 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.79□□□□□ -2.28
MBD4O95243 MIR4282-201ENST00000583613 67 ntBASIC0.79□□□□□ -2.28
MBD4O95243 Z97988.1-201ENST00000637697 135 ntBASIC0.79□□□□□ -2.28
MBD4O95243 RNU6-934P-201ENST00000365154 107 ntBASIC0.78□□□□□ -2.28
MBD4O95243 Y_RNA.459-201ENST00000384251 102 ntBASIC0.78□□□□□ -2.28
MBD4O95243 AL606845.1-201ENST00000404881 255 ntBASIC0.78□□□□□ -2.28
MBD4O95243 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.78□□□□□ -2.28
MBD4O95243 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
MBD4O95243 AC090844.1-201ENST00000422019 156 ntBASIC0.78□□□□□ -2.28
MBD4O95243 AC011195.1-201ENST00000578177 177 ntBASIC0.78□□□□□ -2.28
MBD4O95243 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
MBD4O95243 MIR8055-201ENST00000610739 97 ntBASIC0.78□□□□□ -2.28
MBD4O95243 AC023934.1-201ENST00000574529 2389 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms