Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 RNU11-2P-201ENST00000516898 142 ntBASIC1.03□□□□□ -2.24
NDUFS3O75489 MIR4308-201ENST00000580634 81 ntBASIC1.03□□□□□ -2.24
NDUFS3O75489 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
NDUFS3O75489 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
NDUFS3O75489 Y_RNA.7-201ENST00000362352 102 ntBASIC1.02□□□□□ -2.25
NDUFS3O75489 SNORA1-201ENST00000384107 130 ntBASIC1.02□□□□□ -2.25
NDUFS3O75489 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.02□□□□□ -2.25
NDUFS3O75489 RNU6-237P-201ENST00000515985 71 ntBASIC1.02□□□□□ -2.25
NDUFS3O75489 AL391516.1-201ENST00000554380 2449 ntBASIC1.02□□□□□ -2.25
NDUFS3O75489 AC108706.1-201ENST00000611053 297 ntBASIC1.02□□□□□ -2.25
NDUFS3O75489 Y_RNA.238-201ENST00000364441 102 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 RNU6-396P-201ENST00000365369 105 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 MIR200A-201ENST00000384875 90 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 RNU6-578P-201ENST00000390980 103 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 AL138752.1-201ENST00000452964 351 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 RPS29P24-201ENST00000486345 171 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 MIR2115-201ENST00000516657 100 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 AC036111.3-201ENST00000526389 112 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
NDUFS3O75489 AC004817.2-201ENST00000561794 651 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 RNU6-94P-201ENST00000607728 107 ntBASIC1.01□□□□□ -2.25
NDUFS3O75489 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
NDUFS3O75489 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NDUFS3O75489 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
NDUFS3O75489 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
NDUFS3O75489 RNU6-1189P-201ENST00000383958 107 ntBASIC1□□□□□ -2.25
NDUFS3O75489 SNORA2B-201ENST00000384583 137 ntBASIC1□□□□□ -2.25
NDUFS3O75489 AC090844.1-201ENST00000422019 156 ntBASIC1□□□□□ -2.25
NDUFS3O75489 snoU13.16-201ENST00000459350 104 ntBASIC1□□□□□ -2.25
NDUFS3O75489 Y_RNA.797-201ENST00000515977 94 ntBASIC1□□□□□ -2.25
NDUFS3O75489 MIR3129-201ENST00000581095 76 ntBASIC1□□□□□ -2.25
NDUFS3O75489 AL359821.1-201ENST00000605519 182 ntBASIC1□□□□□ -2.25
NDUFS3O75489 AC012676.2-201ENST00000619258 186 ntBASIC1□□□□□ -2.25
NDUFS3O75489 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
NDUFS3O75489 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.99□□□□□ -2.25
NDUFS3O75489 Y_RNA.182-201ENST00000363880 111 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 RNU6-125P-201ENST00000384505 107 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 RNU4-70P-201ENST00000384579 139 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 Y_RNA.571-201ENST00000384753 98 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 RNU6-913P-201ENST00000390913 95 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 SNORD77.3-201ENST00000391113 65 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 RNU6-613P-201ENST00000410412 108 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 RNU4-43P-201ENST00000410628 137 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.99□□□□□ -2.25
NDUFS3O75489 AC106800.4-201ENST00000614905 153 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 MIR376A2-201ENST00000636782 80 ntBASIC0.99□□□□□ -2.25
NDUFS3O75489 MIR342-201ENST00000362212 99 ntBASIC0.98□□□□□ -2.25
NDUFS3O75489 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
NDUFS3O75489 Y_RNA.410-201ENST00000383992 113 ntBASIC0.98□□□□□ -2.25
NDUFS3O75489 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
NDUFS3O75489 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.98□□□□□ -2.25
NDUFS3O75489 PDCD5P2-201ENST00000507570 312 ntBASIC0.98□□□□□ -2.25
NDUFS3O75489 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
NDUFS3O75489 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
NDUFS3O75489 RNY1-201ENST00000364228 113 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 SNORD113.3-201ENST00000364630 78 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 SNORA22-201ENST00000383907 134 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 Y_RNA.440-201ENST00000384120 114 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 SNORA22C-201ENST00000384614 134 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 RNU6-205P-201ENST00000390858 107 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 RNU6-994P-201ENST00000410507 111 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 AL035398.1-201ENST00000430869 322 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 RNU7-73P-201ENST00000458743 63 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 RNU2-11P-201ENST00000459191 187 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 AC005840.1-201ENST00000498412 377 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 RNU7-53P-201ENST00000516705 60 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 MIR4498-201ENST00000577599 66 ntBASIC0.97□□□□□ -2.25
NDUFS3O75489 MIR411-201ENST00000362239 96 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 Y_RNA.121-201ENST00000363309 113 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 Y_RNA.200-201ENST00000364018 102 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 RNU6-392P-201ENST00000364926 101 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 SNORD111-201ENST00000408139 94 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.96□□□□□ -2.26
NDUFS3O75489 HMGN1P33-201ENST00000432945 451 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 RNU7-96P-201ENST00000459535 64 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.96□□□□□ -2.26
NDUFS3O75489 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.96□□□□□ -2.26
NDUFS3O75489 TRMT112P2-201ENST00000512910 132 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
NDUFS3O75489 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.96□□□□□ -2.26
NDUFS3O75489 Y_RNA.83-201ENST00000363005 113 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 Y_RNA.489-201ENST00000384410 101 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 Y_RNA.542-201ENST00000384641 111 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 FABP5P4-201ENST00000437203 171 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.95□□□□□ -2.26
NDUFS3O75489 RNU6-998P-201ENST00000515894 101 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 MIR378D2-201ENST00000580636 98 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 MIR4661-201ENST00000582720 75 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 AP000753.3-201ENST00000604083 169 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 AL020996.3-201ENST00000606617 222 ntBASIC0.95□□□□□ -2.26
NDUFS3O75489 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
NDUFS3O75489 Y_RNA.168-201ENST00000363740 102 ntBASIC0.94□□□□□ -2.26
NDUFS3O75489 RNU6-978P-201ENST00000364371 103 ntBASIC0.94□□□□□ -2.26
NDUFS3O75489 Y_RNA.338-201ENST00000365320 114 ntBASIC0.94□□□□□ -2.26
NDUFS3O75489 RNU6-47P-201ENST00000383866 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms