Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 MIR214-201ENST00000385214 110 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 PCNPP3-201ENST00000393579 471 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 AL138752.1-201ENST00000452964 351 ntBASIC-0.07□□□□□ -2.42
NPHP4O75161 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.07□□□□□ -2.42
NPHP4O75161 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.08□□□□□ -2.42
NPHP4O75161 RNU6-740P-201ENST00000364734 105 ntBASIC-0.08□□□□□ -2.42
NPHP4O75161 POLR2KP2-201ENST00000438155 177 ntBASIC-0.08□□□□□ -2.42
NPHP4O75161 MTND1P34-201ENST00000438556 671 ntBASIC-0.08□□□□□ -2.42
NPHP4O75161 RNA5SP268-201ENST00000516828 124 ntBASIC-0.08□□□□□ -2.42
NPHP4O75161 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.08□□□□□ -2.42
NPHP4O75161 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 SNORA42.1-201ENST00000363515 137 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 SNORA27-201ENST00000384323 126 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 SNORA40.5-201ENST00000391061 128 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 SNORD93-201ENST00000408813 74 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 AC023449.1-201ENST00000454464 154 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 SNORD36C-201ENST00000516733 66 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 MIR4645-201ENST00000583158 77 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 AC104985.2-201ENST00000620598 500 ntBASIC-0.09□□□□□ -2.42
NPHP4O75161 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 RNU6-187P-201ENST00000384139 106 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 MIR563-201ENST00000385080 79 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 MIR643-201ENST00000385267 97 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
NPHP4O75161 RNU6-763P-201ENST00000390865 106 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 RNU6-876P-201ENST00000391295 104 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 RNU6-693P-201ENST00000516134 107 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 AC113139.1-201ENST00000605049 239 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 MIR8066-201ENST00000617280 78 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 AC099654.14-201ENST00000638599 341 ntBASIC-0.1□□□□□ -2.43
NPHP4O75161 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 SNORA9.1-201ENST00000362412 131 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 RNY3-201ENST00000365484 102 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 SNORD116-29-201ENST00000384516 83 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 MT-TL1-201ENST00000386347 75 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 RNU4-83P-201ENST00000410863 133 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 AL512326.2-201ENST00000426359 151 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 HMGN2P22-201ENST00000427588 175 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 SUMO1P3-201ENST00000439961 304 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 RPS29P24-201ENST00000486345 171 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 RNU7-129P-201ENST00000516128 62 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 RNU6-191P-201ENST00000516295 94 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 RNU7-53P-201ENST00000516705 60 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.11□□□□□ -2.43
NPHP4O75161 MIR7107-201ENST00000611489 80 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 AC093783.1-201ENST00000612976 329 ntBASIC-0.11□□□□□ -2.43
NPHP4O75161 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 RNU6-899P-201ENST00000363947 107 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 AC087499.4-201ENST00000448505 178 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 RNU2-11P-201ENST00000459191 187 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 RNU6-469P-201ENST00000516253 101 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 SNORD116.3-201ENST00000517176 78 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 RPS29P30-201ENST00000600975 111 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 AC092447.9-201ENST00000603395 144 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 AC133104.2-201ENST00000615272 193 ntBASIC-0.12□□□□□ -2.43
NPHP4O75161 MIR342-201ENST00000362212 99 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 SNORD63-201ENST00000384262 68 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 MIR548A2-201ENST00000384956 97 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 MT-TF-201ENST00000387314 71 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNA5SP227-201ENST00000516184 113 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 AL121655.1-201ENST00000605811 308 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 AL021707.8-201ENST00000609428 183 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 AC025253.1-201ENST00000613623 543 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 AC084781.2-201ENST00000615568 161 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 AP001282.2-201ENST00000616149 309 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNU6-403P-201ENST00000363163 104 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNU6-597P-201ENST00000365620 102 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 SNORD61-201ENST00000384252 73 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 MIR593-201ENST00000384856 100 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNU6-127P-201ENST00000390897 107 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNU7-45P-201ENST00000459460 63 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 MRPS35P2-201ENST00000508242 191 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNU6-764P-201ENST00000516396 105 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.13□□□□□ -2.43
NPHP4O75161 SNORA72.1-201ENST00000363485 129 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.14□□□□□ -2.43
NPHP4O75161 SNORA26-201ENST00000391286 122 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms