Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-437P-201ENST00000459408 95 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 RPS29P25-201ENST00000481709 171 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 FTX_2.1-201ENST00000618816 94 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 AL391099.1-201ENST00000624635 187 ntBASIC-0.31□□□□□ -2.46
SHOX2O60902 RNU4-75P-201ENST00000364621 146 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 MIR760-201ENST00000390220 80 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 SNORA26-201ENST00000391286 122 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 MTCO1P5-201ENST00000433573 344 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 AC107399.1-201ENST00000451226 265 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.32□□□□□ -2.46
SHOX2O60902 RNU7-129P-201ENST00000516128 62 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 RNU7-53P-201ENST00000516705 60 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 AP000942.4-201ENST00000604811 241 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 MIR3666-201ENST00000607845 111 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 MIR8055-201ENST00000610739 97 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.32□□□□□ -2.46
SHOX2O60902 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.32□□□□□ -2.46
SHOX2O60902 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 RNU6-510P-201ENST00000391239 108 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 MIR548F5-201ENST00000408421 86 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 SNORD11-201ENST00000459124 84 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 RNA5SP180-201ENST00000516181 101 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 RNU6-966P-201ENST00000516479 104 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 RNU7-25P-201ENST00000516544 62 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 RNU7-4P-201ENST00000516961 62 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 RNU6-958P-201ENST00000516995 106 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 AC144568.1-201ENST00000520139 137 ntBASIC-0.33□□□□□ -2.46
SHOX2O60902 AL596211.1-201ENST00000569873 2277 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.34□□□□□ -2.46
SHOX2O60902 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 SNORA75.4-201ENST00000391278 119 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 AL590004.1-201ENST00000405321 300 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 MIR548O-201ENST00000408583 114 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 SPINT5P-201ENST00000448174 155 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 AC087499.4-201ENST00000448505 178 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 AC091951.2-201ENST00000500762 203 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 AC021146.9-201ENST00000512503 156 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 MIR4659A-201ENST00000580269 81 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 RNU1-29P-201ENST00000606574 126 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 MIR8066-201ENST00000617280 78 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 MIR499B-201ENST00000636498 73 ntBASIC-0.34□□□□□ -2.46
SHOX2O60902 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 RNU6-480P-201ENST00000384332 107 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 AF228730.4-201ENST00000421457 183 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 POLR2KP2-201ENST00000438155 177 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.35□□□□□ -2.47
SHOX2O60902 RNU6-180P-201ENST00000516697 61 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.35□□□□□ -2.47
SHOX2O60902 AC091304.10-201ENST00000641554 121 ntBASIC-0.35□□□□□ -2.47
SHOX2O60902 MIR30D-201ENST00000362283 70 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 SNORD114-12-201ENST00000365400 75 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 RNU6-602P-201ENST00000411155 105 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 FCF1P9-201ENST00000412546 282 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 SUMO1P3-201ENST00000439961 304 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 AC023449.1-201ENST00000454464 154 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-0.36□□□□□ -2.47
SHOX2O60902 RNY4-201ENST00000516507 96 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 RNU6-504P-201ENST00000516568 104 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 AC011921.3-201ENST00000605540 361 ntBASIC-0.36□□□□□ -2.47
SHOX2O60902 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNA5SP192-201ENST00000364404 120 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNU6-913P-201ENST00000390913 95 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 SNORA40.5-201ENST00000391061 128 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 SNORA36B-201ENST00000410438 131 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNU4-83P-201ENST00000410863 133 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RPL30P15-201ENST00000457129 321 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNU7-159P-201ENST00000459284 62 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RPL39P34-201ENST00000477141 156 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 AC114755.3-201ENST00000481111 251 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNU6-264P-201ENST00000517134 104 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNA5SP47-201ENST00000517230 109 ntBASIC-0.37□□□□□ -2.47
SHOX2O60902 RNU4-50P-201ENST00000364361 141 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 RNU6-740P-201ENST00000364734 105 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 SNORD93-201ENST00000408813 74 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 RNU6-284P-201ENST00000411105 106 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.38□□□□□ -2.47
SHOX2O60902 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.38□□□□□ -2.47
SHOX2O60902 RNU6-911P-201ENST00000516523 104 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 AC245505.1-201ENST00000556398 224 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 uc_338.28-201ENST00000612082 187 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.38□□□□□ -2.47
SHOX2O60902 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.39□□□□□ -2.47
SHOX2O60902 MIR196A1-201ENST00000388006 70 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 261.6 ms