Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 SNORA40.5-201ENST00000391061 128 ntBASIC1.54□□□□□ -2.16
SNX2O60749 snoU13.25-201ENST00000458945 104 ntBASIC1.54□□□□□ -2.16
SNX2O60749 RNU2-13P-201ENST00000515909 113 ntBASIC1.54□□□□□ -2.16
SNX2O60749 SNORD111.1-201ENST00000516421 86 ntBASIC1.54□□□□□ -2.16
SNX2O60749 AC090821.2-201ENST00000523552 176 ntBASIC1.54□□□□□ -2.16
SNX2O60749 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.54□□□□□ -2.16
SNX2O60749 AC112693.2-201ENST00000556538 232 ntBASIC1.54□□□□□ -2.16
SNX2O60749 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
SNX2O60749 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
SNX2O60749 SNORD115-34-201ENST00000362441 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-12-201ENST00000362583 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-29-201ENST00000362834 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-9-201ENST00000362912 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-21-201ENST00000362963 81 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-14-201ENST00000363090 81 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-13-201ENST00000363358 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-41-201ENST00000363608 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-11-201ENST00000363616 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-5-201ENST00000363633 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-39-201ENST00000363694 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-4-201ENST00000363810 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-16-201ENST00000363887 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-6-201ENST00000363942 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-42-201ENST00000364273 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-15-201ENST00000364809 81 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-1-201ENST00000364961 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-26-201ENST00000365067 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-10-201ENST00000365073 81 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORA1.2-201ENST00000365189 134 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-43-201ENST00000365503 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-36-201ENST00000365629 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 Y_RNA.400-201ENST00000383963 111 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORA27-201ENST00000384323 126 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
SNX2O60749 RNU4-62P-201ENST00000410125 130 ntBASIC1.53□□□□□ -2.16
SNX2O60749 AL603825.1-201ENST00000438481 80 ntBASIC1.53□□□□□ -2.16
SNX2O60749 RNU7-43P-201ENST00000516554 64 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SCARNA15-202ENST00000516881 127 ntBASIC1.53□□□□□ -2.16
SNX2O60749 MTND5P32-201ENST00000560711 1802 ntBASIC1.53□□□□□ -2.16
SNX2O60749 AL645939.4-201ENST00000604495 135 ntBASIC1.53□□□□□ -2.16
SNX2O60749 SNORD115-40-201ENST00000606510 82 ntBASIC1.53□□□□□ -2.16
SNX2O60749 MIR378A-201ENST00000362177 66 ntBASIC1.52□□□□□ -2.17
SNX2O60749 Y_RNA.52-201ENST00000362760 96 ntBASIC1.52□□□□□ -2.17
SNX2O60749 Y_RNA.215-201ENST00000364204 112 ntBASIC1.52□□□□□ -2.17
SNX2O60749 Y_RNA.251-201ENST00000364551 99 ntBASIC1.52□□□□□ -2.17
SNX2O60749 RNU6-125P-201ENST00000384505 107 ntBASIC1.52□□□□□ -2.17
SNX2O60749 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
SNX2O60749 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.52□□□□□ -2.17
SNX2O60749 RNU7-197P-201ENST00000458836 62 ntBASIC1.52□□□□□ -2.17
SNX2O60749 RNA5SP272-201ENST00000516095 111 ntBASIC1.52□□□□□ -2.17
SNX2O60749 RNU6-1149P-201ENST00000516810 97 ntBASIC1.52□□□□□ -2.17
SNX2O60749 MIR4791-201ENST00000607666 84 ntBASIC1.52□□□□□ -2.17
SNX2O60749 AC008133.2-201ENST00000624540 351 ntBASIC1.52□□□□□ -2.17
SNX2O60749 MTND1P7-201ENST00000632801 297 ntBASIC1.52□□□□□ -2.17
SNX2O60749 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.52□□□□□ -2.17
SNX2O60749 MIR26B-201ENST00000362251 77 ntBASIC1.51□□□□□ -2.17
SNX2O60749 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
SNX2O60749 SNORA25.8-201ENST00000364831 128 ntBASIC1.51□□□□□ -2.17
SNX2O60749 MIR569-201ENST00000385228 96 ntBASIC1.51□□□□□ -2.17
SNX2O60749 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
SNX2O60749 BTF3P4-201ENST00000418852 495 ntBASIC1.51□□□□□ -2.17
SNX2O60749 SNORA25.12-201ENST00000516202 82 ntBASIC1.51□□□□□ -2.17
SNX2O60749 MIR342-201ENST00000362212 99 ntBASIC1.5□□□□□ -2.17
SNX2O60749 Y_RNA.338-201ENST00000365320 114 ntBASIC1.5□□□□□ -2.17
SNX2O60749 Y_RNA.351-201ENST00000365436 96 ntBASIC1.5□□□□□ -2.17
SNX2O60749 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
SNX2O60749 RNU6-460P-201ENST00000391158 108 ntBASIC1.5□□□□□ -2.17
SNX2O60749 AC107297.1-201ENST00000459991 176 ntBASIC1.5□□□□□ -2.17
SNX2O60749 SNORA31.4-201ENST00000516049 129 ntBASIC1.5□□□□□ -2.17
SNX2O60749 RNU2-60P-201ENST00000517290 128 ntBASIC1.5□□□□□ -2.17
SNX2O60749 DNAJC19P9-201ENST00000555084 351 ntBASIC1.5□□□□□ -2.17
SNX2O60749 MIR3133-201ENST00000583157 78 ntBASIC1.5□□□□□ -2.17
SNX2O60749 AC131055.1-201ENST00000584626 316 ntBASIC1.5□□□□□ -2.17
SNX2O60749 AL357312.1-201ENST00000603879 298 ntBASIC1.5□□□□□ -2.17
SNX2O60749 AC243994.1-201ENST00000618627 109 ntBASIC1.5□□□□□ -2.17
SNX2O60749 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNX2O60749 RNU6-508P-201ENST00000363231 103 ntBASIC1.49□□□□□ -2.17
SNX2O60749 Y_RNA.537-201ENST00000384626 109 ntBASIC1.49□□□□□ -2.17
SNX2O60749 SNORA20-201ENST00000384662 132 ntBASIC1.49□□□□□ -2.17
SNX2O60749 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX2O60749 RNU7-67P-201ENST00000459003 62 ntBASIC1.49□□□□□ -2.17
SNX2O60749 RPS29P24-201ENST00000486345 171 ntBASIC1.49□□□□□ -2.17
SNX2O60749 RNU6-958P-201ENST00000516995 106 ntBASIC1.49□□□□□ -2.17
SNX2O60749 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
SNX2O60749 MIR548X2-201ENST00000579776 100 ntBASIC1.49□□□□□ -2.17
SNX2O60749 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SNX2O60749 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.49□□□□□ -2.17
SNX2O60749 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
SNX2O60749 SNORA25.3-201ENST00000363205 127 ntBASIC1.48□□□□□ -2.17
SNX2O60749 RNY1P5-201ENST00000383890 115 ntBASIC1.48□□□□□ -2.17
SNX2O60749 SNORA24-201ENST00000384096 131 ntBASIC1.48□□□□□ -2.17
SNX2O60749 SNORA51.10-201ENST00000384418 136 ntBASIC1.48□□□□□ -2.17
SNX2O60749 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
SNX2O60749 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
SNX2O60749 Y_RNA.584-201ENST00000391090 114 ntBASIC1.48□□□□□ -2.17
SNX2O60749 SUMO1P3-201ENST00000439961 304 ntBASIC1.48□□□□□ -2.17
SNX2O60749 RPS29P29-201ENST00000456396 171 ntBASIC1.48□□□□□ -2.17
SNX2O60749 Y_RNA.686-201ENST00000516548 134 ntBASIC1.48□□□□□ -2.17
SNX2O60749 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms