Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MIR215-201ENST00000384858 110 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 MIR1257-201ENST00000408490 117 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 MIR1197-201ENST00000408818 88 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 RNU7-73P-201ENST00000458743 63 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 snoU13.2-201ENST00000459201 104 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 AC107297.1-201ENST00000459991 176 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 C8orf59P2-201ENST00000603441 271 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 MIR376A1-201ENST00000616574 68 ntBASIC0.12□□□□□ -2.39
CHMP2AO43633 Y_RNA.26-201ENST00000362539 101 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 SNORD118-201ENST00000363593 134 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-740P-201ENST00000364734 105 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 Y_RNA.293-201ENST00000364908 93 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 Y_RNA.569-201ENST00000384749 103 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-1319P-201ENST00000390855 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-747P-201ENST00000390928 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-241P-201ENST00000391148 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 Y_RNA.587-201ENST00000391210 103 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-447P-201ENST00000410293 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-1118P-201ENST00000410382 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-1076P-201ENST00000410397 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-355P-201ENST00000410427 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-791P-201ENST00000410467 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-705P-201ENST00000410601 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-1100P-201ENST00000410691 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-860P-201ENST00000410860 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-1217P-201ENST00000411276 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-785P-201ENST00000411324 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 AF228730.3-201ENST00000436691 102 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 SNORD77.4-201ENST00000516158 81 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-897P-201ENST00000517135 105 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 SNORD92-201ENST00000585078 85 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 AL355297.3-201ENST00000604082 446 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 AL008718.3-201ENST00000610217 321 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 U6.90-201ENST00000614007 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 U6.70-201ENST00000620287 104 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 MIR376A2-201ENST00000636782 80 ntBASIC0.11□□□□□ -2.39
CHMP2AO43633 RNU6-1272P-201ENST00000362776 107 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 SNORA1.1-201ENST00000364671 133 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 RNU6-806P-201ENST00000365147 105 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 RNU6-1138P-201ENST00000365359 106 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 MIR563-201ENST00000385080 79 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 PMCHL1-202ENST00000423102 261 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 MIR18B-201ENST00000454574 71 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 RNU2-11P-201ENST00000459191 187 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 RPS29P24-201ENST00000486345 171 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 FGF7P4-201ENST00000509595 295 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 MTCO2P24-201ENST00000515611 426 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 MIR5692C2-201ENST00000577959 77 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 AP001282.2-201ENST00000616149 309 ntBASIC0.1□□□□□ -2.39
CHMP2AO43633 MIR369-201ENST00000362155 70 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 MIR367-201ENST00000362299 68 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 Y_RNA.91-201ENST00000363042 107 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 Y_RNA.136-201ENST00000363444 102 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 Y_RNA.419-201ENST00000384041 102 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 Y_RNA.541-201ENST00000384640 113 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 SNORD115-46-201ENST00000390982 71 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 SNORA40.5-201ENST00000391061 128 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.09□□□□□ -2.4
CHMP2AO43633 RNU6-976P-201ENST00000516086 111 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 RNU2-31P-201ENST00000516954 155 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 MIR4795-201ENST00000584182 89 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 AL133255.1-201ENST00000606374 441 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 MIR8066-201ENST00000617280 78 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 uc_338.22-201ENST00000622722 187 ntBASIC0.09□□□□□ -2.4
CHMP2AO43633 Y_RNA.14-201ENST00000362415 103 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 Y_RNA.16-201ENST00000362421 102 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 snoU2_19.2-201ENST00000363024 80 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 Y_RNA.197-201ENST00000364004 102 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 MIR1302-11-201ENST00000408051 138 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 MIR1302-9-201ENST00000408365 138 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 MIR1302-10-201ENST00000408734 138 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 SNORD71-201ENST00000411292 86 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 RPL21P38-201ENST00000418090 167 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 MTND4P19-201ENST00000446659 478 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.08□□□□□ -2.4
CHMP2AO43633 RNU6-1007P-201ENST00000516586 107 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 RNU6-448P-201ENST00000517052 107 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.08□□□□□ -2.4
CHMP2AO43633 MIR4724-201ENST00000579485 89 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 AC124312.5-201ENST00000604451 268 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 MIR1302-2-201ENST00000607096 138 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 snoU18.1-201ENST00000629629 71 ntBASIC0.08□□□□□ -2.4
CHMP2AO43633 Y_RNA.24-201ENST00000362508 103 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 Y_RNA.70-201ENST00000362886 110 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 RNU6-144P-201ENST00000383951 107 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 RNU6-187P-201ENST00000384139 106 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 Y_RNA.445-201ENST00000384168 102 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 MT-TT-201ENST00000387460 66 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 RNU6-1228P-201ENST00000391014 107 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 MIR548I3-201ENST00000408378 149 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 AC069271.1-201ENST00000445577 156 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 AC087499.4-201ENST00000448505 178 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.07□□□□□ -2.4
CHMP2AO43633 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
CHMP2AO43633 AC069113.3-201ENST00000521019 150 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 AC100767.1-201ENST00000528178 123 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 AL138825.1-201ENST00000618587 192 ntBASIC0.07□□□□□ -2.4
CHMP2AO43633 Y_RNA.42-201ENST00000362660 108 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms