Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.6□□□□□ -2.51
SGCEO43556 MIR4677-201ENST00000584153 80 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 AC005357.1-201ENST00000588399 301 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 SNORA70.25-201ENST00000612741 95 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 TPTEP1-208ENST00000636884 213 ntBASIC-0.6□□□□□ -2.51
SGCEO43556 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 SNORA75.1-201ENST00000391130 148 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 MIR548L-201ENST00000408303 86 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 MIR548I3-201ENST00000408378 149 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 RPL21P38-201ENST00000418090 167 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 MTND4P19-201ENST00000446659 478 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 RNU7-96P-201ENST00000459535 64 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 AC138749.4-201ENST00000563970 127 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 MIR4493-201ENST00000584016 73 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 AL162376.1-201ENST00000624117 175 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 AL162726.3-218ENST00000636401 95 ntBASIC-0.61□□□□□ -2.51
SGCEO43556 RNU4-73P-201ENST00000363164 141 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 RNU6-535P-201ENST00000384722 107 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 RNU6-938P-201ENST00000411285 103 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 RNU6-475P-201ENST00000516073 104 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 RNU6-911P-201ENST00000516523 104 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 MIR378D2-201ENST00000580636 98 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 MIR4423-201ENST00000580922 80 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 AC010205.1-201ENST00000616668 449 ntBASIC-0.62□□□□□ -2.51
SGCEO43556 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.62□□□□□ -2.51
SGCEO43556 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 RNA5SP368-201ENST00000364298 116 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 Y_RNA.339-201ENST00000365325 102 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 MIR628-201ENST00000385229 95 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.63□□□□□ -2.51
SGCEO43556 RNU2-11P-201ENST00000459191 187 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 RNU7-169P-201ENST00000459456 61 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 MIR4802-201ENST00000581881 80 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 MIR4263-201ENST00000584745 83 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 AP001282.2-201ENST00000616149 309 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 AL662814.1-201ENST00000617364 121 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.63□□□□□ -2.51
SGCEO43556 MIR655-201ENST00000362159 97 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 SNORD81.1-201ENST00000363064 77 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 RNU6-726P-201ENST00000364680 107 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 RNU6-811P-201ENST00000384069 107 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 SNORA72.4-201ENST00000384174 132 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 MIR876-201ENST00000401147 81 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 RNA5SP261-201ENST00000410536 106 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 AC096949.1-201ENST00000412047 152 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 RNU6-758P-201ENST00000516292 89 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 MIR4662B-201ENST00000579498 81 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 AC122108.2-201ENST00000611946 526 ntBASIC-0.64□□□□□ -2.51
SGCEO43556 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 SNORA25.7-201ENST00000364375 127 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 SNORA22B-201ENST00000383876 138 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 RNU6-144P-201ENST00000383951 107 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 RNU6-708P-201ENST00000384217 107 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 U8.15-201ENST00000390947 134 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 MIR1912-201ENST00000410389 80 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 Z95118.1-201ENST00000421372 247 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 MTND5P34-201ENST00000568888 325 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 MIR4491-201ENST00000581087 68 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.65□□□□□ -2.51
SGCEO43556 AL590491.3-201ENST00000610731 82 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 U2.1-201ENST00000618978 145 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 U6.92-201ENST00000636464 89 ntBASIC-0.65□□□□□ -2.51
SGCEO43556 AL596211.1-201ENST00000569873 2277 ntBASIC-0.66□□□□□ -2.51
SGCEO43556 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 SNORA72.6-201ENST00000384520 129 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 MIR196A1-201ENST00000388006 70 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 MTND3P8-201ENST00000412909 339 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 AC244250.2-201ENST00000418731 148 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.66□□□□□ -2.52
SGCEO43556 RNU6-998P-201ENST00000515894 101 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 RNU6-693P-201ENST00000516134 107 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 AP003072.1-201ENST00000531740 145 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 AC011373.1-201ENST00000607270 237 ntBASIC-0.66□□□□□ -2.52
SGCEO43556 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 RNA5SP169-201ENST00000517268 117 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 AC245505.1-201ENST00000556398 224 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 AL133255.1-201ENST00000606374 441 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 MIR6717-201ENST00000622747 73 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 AP000770.2-201ENST00000623694 100 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 AL669831.3-213ENST00000636676 183 ntBASIC-0.67□□□□□ -2.52
SGCEO43556 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms