Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SRGAP3O43295 MIR1267-201ENST00000408723 78 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.31□□□□□ -2.04
SRGAP3O43295 SNORA72.7-201ENST00000516349 94 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 MIR3683-201ENST00000580847 82 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 RNU6-94P-201ENST00000607728 107 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 MIR6845-201ENST00000613182 61 ntBASIC2.31□□□□□ -2.04
SRGAP3O43295 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
SRGAP3O43295 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.3□□□□□ -2.04
SRGAP3O43295 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-34-201ENST00000362441 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-12-201ENST00000362583 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-29-201ENST00000362834 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-9-201ENST00000362912 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-21-201ENST00000362963 81 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-14-201ENST00000363090 81 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-13-201ENST00000363358 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 RNU6-833P-201ENST00000363486 107 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-41-201ENST00000363608 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-11-201ENST00000363616 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-5-201ENST00000363633 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-39-201ENST00000363694 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-4-201ENST00000363810 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-16-201ENST00000363887 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-6-201ENST00000363942 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-42-201ENST00000364273 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORA63D-201ENST00000364359 132 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-15-201ENST00000364809 81 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-1-201ENST00000364961 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-26-201ENST00000365067 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-10-201ENST00000365073 81 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 Y_RNA.348-201ENST00000365403 103 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-43-201ENST00000365503 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-36-201ENST00000365629 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 Y_RNA.494-201ENST00000384432 111 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 MIR583-201ENST00000384846 75 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 MIR518A2-201ENST00000384966 87 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 RNA5SP465-201ENST00000391195 109 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 RNU7-96P-201ENST00000459535 64 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 RPS29P11-201ENST00000496507 171 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 RNU6-998P-201ENST00000515894 101 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 RNA5SP364-201ENST00000516938 78 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 AC068339.1-201ENST00000526965 141 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 AC141557.1-201ENST00000540982 400 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 MIR5009-201ENST00000578736 100 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 SNORD115-40-201ENST00000606510 82 ntBASIC2.3□□□□□ -2.04
SRGAP3O43295 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.3□□□□□ -2.04
SRGAP3O43295 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SRGAP3O43295 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SRGAP3O43295 RNU6-1031P-201ENST00000384773 107 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 MIR520A-201ENST00000384862 85 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 MIR9-3-201ENST00000385084 90 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 AC093850.1-201ENST00000454121 251 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 RNU2-11P-201ENST00000459191 187 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 RPL23AP63-201ENST00000498752 471 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 RNU7-6P-201ENST00000516845 62 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 RNU6-295P-201ENST00000516901 104 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 MIR3935-201ENST00000583472 104 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 AP001318.4-201ENST00000616637 121 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 uc_338.20-201ENST00000621563 178 ntBASIC2.29□□□□□ -2.04
SRGAP3O43295 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
SRGAP3O43295 RNU6-640P-201ENST00000363693 105 ntBASIC2.28□□□□□ -2.04
SRGAP3O43295 Y_RNA.369-201ENST00000365568 117 ntBASIC2.28□□□□□ -2.04
SRGAP3O43295 SNORA19.1-201ENST00000410656 129 ntBASIC2.28□□□□□ -2.04
SRGAP3O43295 AC107297.1-201ENST00000459991 176 ntBASIC2.28□□□□□ -2.04
SRGAP3O43295 RNA5SP437-201ENST00000517249 129 ntBASIC2.28□□□□□ -2.04
SRGAP3O43295 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.28□□□□□ -2.04
SRGAP3O43295 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
SRGAP3O43295 MIR452-201ENST00000385020 85 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 RNA5SP144-201ENST00000410846 116 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 AL022718.1-201ENST00000412004 84 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 RPL39P25-201ENST00000449384 154 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 RNU6-109P-201ENST00000516364 107 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 SNORA40.13-201ENST00000516379 120 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 RNU6-184P-201ENST00000516514 107 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 MIR4709-201ENST00000577272 72 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 AL513534.2-201ENST00000603836 250 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 AC021613.1-201ENST00000623880 111 ntBASIC2.27□□□□□ -2.05
SRGAP3O43295 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SRGAP3O43295 SNORA16.1-201ENST00000364597 132 ntBASIC2.26□□□□□ -2.05
SRGAP3O43295 Y_RNA.544-201ENST00000384650 113 ntBASIC2.26□□□□□ -2.05
SRGAP3O43295 MIR590-201ENST00000385008 97 ntBASIC2.26□□□□□ -2.05
SRGAP3O43295 SNORA48.1-201ENST00000390879 135 ntBASIC2.26□□□□□ -2.05
SRGAP3O43295 HMGN2P39-201ENST00000398005 273 ntBASIC2.26□□□□□ -2.05
SRGAP3O43295 RNU7-45P-201ENST00000459460 63 ntBASIC2.26□□□□□ -2.05
SRGAP3O43295 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
SRGAP3O43295 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.25□□□□□ -2.05
SRGAP3O43295 RNU6-1131P-201ENST00000364955 107 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 SNORA1.2-201ENST00000365189 134 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 Y_RNA.370-201ENST00000365589 108 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 MIR504-201ENST00000385065 83 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 MIR136-201ENST00000385207 82 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SRGAP3O43295 RNA5SP501-201ENST00000410990 112 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 RNA5SP270-201ENST00000411361 118 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 SNORA31.4-201ENST00000516049 129 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 RNU6-970P-201ENST00000516312 107 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 AC021506.2-201ENST00000612354 169 ntBASIC2.25□□□□□ -2.05
SRGAP3O43295 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SRGAP3O43295 AL162726.3-218ENST00000636401 95 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms