Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-762P-201ENST00000517107 102 ntBASIC2.17□□□□□ -2.06
FOXN1O15353 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
FOXN1O15353 MIR4658-201ENST00000584344 65 ntBASIC2.17□□□□□ -2.06
FOXN1O15353 AL596211.1-201ENST00000569873 2277 ntBASIC2.17□□□□□ -2.06
FOXN1O15353 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXN1O15353 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 Y_RNA.242-201ENST00000364473 110 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 SNORA25B-201ENST00000365507 128 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 MIR488-201ENST00000365739 83 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 Y_RNA.410-201ENST00000383992 113 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 SNORA8-201ENST00000384574 139 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 MIR590-201ENST00000385008 97 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 MIR802-201ENST00000390235 94 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 RNA5SP323-201ENST00000391094 133 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 SNORA19.1-201ENST00000410656 129 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 RNY4P29-201ENST00000410801 97 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 RPS29P11-201ENST00000496507 171 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 AL163195.1-201ENST00000496941 348 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 SNORD36C-201ENST00000516733 66 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXN1O15353 MIR5009-201ENST00000578736 100 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 AC006441.5-201ENST00000612680 209 ntBASIC2.16□□□□□ -2.06
FOXN1O15353 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXN1O15353 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
FOXN1O15353 Y_RNA.37-201ENST00000362606 108 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 RNU6-268P-201ENST00000364174 107 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 RNU6-1113P-201ENST00000384348 107 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 RNU1-148P-201ENST00000384472 162 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 Y_RNA.547-201ENST00000384654 119 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 SNORA26.2-201ENST00000390922 122 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 SNRPGP14-201ENST00000435400 219 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 SUMO2P16-201ENST00000519475 264 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 AC068339.1-201ENST00000526965 141 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 AP002004.2-201ENST00000531656 154 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 AC021443.1-201ENST00000604478 211 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 AL353149.1-201ENST00000610667 244 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
FOXN1O15353 MIR203B-201ENST00000636080 86 ntBASIC2.15□□□□□ -2.07
FOXN1O15353 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
FOXN1O15353 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
FOXN1O15353 AC245060.5-201ENST00000610778 3293 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 RNU6-1084P-201ENST00000362498 107 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 SNORD115-28-201ENST00000363931 81 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 SNORA38-201ENST00000363946 132 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 Y_RNA.213-201ENST00000364178 111 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 Y_RNA.298-201ENST00000364960 107 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 RNU6-442P-201ENST00000383968 104 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 RNU6-1104P-201ENST00000384723 104 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 SUMO2P12-201ENST00000405924 140 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 RNU6-938P-201ENST00000411285 103 ntBASIC2.14□□□□□ -2.07
FOXN1O15353 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.14□□□□□ -2.07
FOXN1O15353 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
FOXN1O15353 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
FOXN1O15353 SNORD14E-201ENST00000364009 85 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 SNORA67.1-201ENST00000364749 141 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 Y_RNA.344-201ENST00000365381 112 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 Y_RNA.440-201ENST00000384120 114 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 Y_RNA.544-201ENST00000384650 113 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 RNY1P7-201ENST00000384743 110 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXN1O15353 RNU6-970P-201ENST00000516312 107 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 SNORD45.4-201ENST00000516629 73 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 RNA5SP364-201ENST00000516938 78 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.13□□□□□ -2.07
FOXN1O15353 MIR4762-201ENST00000585261 75 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.13□□□□□ -2.07
FOXN1O15353 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.13□□□□□ -2.07
FOXN1O15353 RNU6-862P-201ENST00000362804 105 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 RNY1P6-201ENST00000384193 109 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 Y_RNA.558-201ENST00000384685 113 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 MIR759-201ENST00000390224 91 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
FOXN1O15353 U8.17-201ENST00000391292 132 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 RNU7-164P-201ENST00000459221 62 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 RNU7-94P-201ENST00000459576 63 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 RNU7-70P-201ENST00000516941 66 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 AC022523.2-201ENST00000561045 150 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 MIR4255-201ENST00000579351 72 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 HSPE1P19-201ENST00000603327 295 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 MIR502-201ENST00000606349 86 ntBASIC2.12□□□□□ -2.07
FOXN1O15353 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
FOXN1O15353 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXN1O15353 MIR96-201ENST00000362288 78 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 Y_RNA.99-201ENST00000363138 105 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 U8.5-201ENST00000364528 136 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 RNU1-133P-201ENST00000364867 167 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 snoU2-30.1-201ENST00000365012 70 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 RNU1-52P-201ENST00000384190 164 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 MIR1262-201ENST00000408276 93 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 AC099677.2-201ENST00000436385 175 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 RNU1-131P-201ENST00000458943 161 ntBASIC2.11□□□□□ -2.07
FOXN1O15353 RNU7-123P-201ENST00000515911 60 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms