Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RNU7-96P-201ENST00000459535 64 ntBASIC-0.52□□□□□ -2.49
SDCBPO00560 AC006157.1-201ENST00000611750 366 ntBASIC-0.52□□□□□ -2.49
SDCBPO00560 U2.1-201ENST00000618978 145 ntBASIC-0.52□□□□□ -2.49
SDCBPO00560 MIR342-201ENST00000362212 99 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 RNU6-653P-201ENST00000363074 106 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 RNU4-80P-201ENST00000363200 141 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 RNA5SP275-201ENST00000363936 118 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 AL160004.2-201ENST00000432935 350 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 AF228730.3-201ENST00000436691 102 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 MTATP6P26-201ENST00000445926 662 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.53□□□□□ -2.49
SDCBPO00560 uc_338.28-201ENST00000612082 187 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 AC099654.14-201ENST00000638599 341 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 AL596211.1-201ENST00000569873 2277 ntBASIC-0.53□□□□□ -2.49
SDCBPO00560 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 RNA5SP257-201ENST00000363023 116 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 SNORD49B-201ENST00000365172 72 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 SNORA22B-201ENST00000383876 138 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.54□□□□□ -2.5
SDCBPO00560 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.54□□□□□ -2.5
SDCBPO00560 SNORD77.4-201ENST00000516158 81 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 RNU7-4P-201ENST00000516961 62 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 AC144568.1-201ENST00000520139 137 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 CR383656.4-201ENST00000546909 122 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 MIR5706-201ENST00000579841 80 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.54□□□□□ -2.5
SDCBPO00560 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 RNU6-949P-201ENST00000384040 107 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 MTND3P8-201ENST00000412909 339 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 AC096531.1-201ENST00000419107 107 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 RNU7-110P-201ENST00000516891 62 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 RNU7-161P-201ENST00000517289 62 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 AC138749.4-201ENST00000563970 127 ntBASIC-0.55□□□□□ -2.5
SDCBPO00560 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 RNU6-888P-201ENST00000363010 101 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 SNORD114-31-201ENST00000363219 75 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 SNORD115-24-201ENST00000363528 82 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 SNORD24-201ENST00000383884 75 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 RNU6-310P-201ENST00000384655 107 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 MIR181A1-201ENST00000385026 110 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.56□□□□□ -2.5
SDCBPO00560 SNORD126-201ENST00000459475 77 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 AP003072.1-201ENST00000531740 145 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 MIR378D2-201ENST00000580636 98 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 AC011373.1-201ENST00000607270 237 ntBASIC-0.56□□□□□ -2.5
SDCBPO00560 MIR655-201ENST00000362159 97 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 SNORD14C-201ENST00000365382 88 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 SNORA1-201ENST00000384107 130 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 RNU6-890P-201ENST00000384121 107 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 MIR628-201ENST00000385229 95 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 RNU6-763P-201ENST00000390865 106 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 SNORA75.1-201ENST00000391130 148 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 RNU6-510P-201ENST00000391239 108 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 HMGN2P22-201ENST00000427588 175 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 MTND1P29-201ENST00000448112 647 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 AC023449.1-201ENST00000454464 154 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 MTND4P17-201ENST00000470444 350 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 RNU6-911P-201ENST00000516523 104 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 Y_RNA.688-201ENST00000516565 95 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 RNU6-531P-201ENST00000516694 104 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 AC245505.1-201ENST00000556398 224 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 AC103591.3-201ENST00000608684 209 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.57□□□□□ -2.5
SDCBPO00560 AC048344.4-201ENST00000619744 527 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 MIR376A2-201ENST00000636782 80 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 MIR4788-201ENST00000639104 80 ntBASIC-0.57□□□□□ -2.5
SDCBPO00560 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.58□□□□□ -2.5
SDCBPO00560 MIR148A-201ENST00000362215 68 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 RNU6-899P-201ENST00000363947 107 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 RNU6-702P-201ENST00000364982 107 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 RNY1P13-201ENST00000365030 105 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 RNU6-937P-201ENST00000384325 106 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 SNORD116-1-201ENST00000384335 95 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 MIR196A2-201ENST00000385189 110 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 MIR876-201ENST00000401147 81 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 AC244250.2-201ENST00000418731 148 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 AC109327.2-201ENST00000448339 378 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 RNU6-264P-201ENST00000517134 104 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 IGLVI-20-201ENST00000519296 130 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 AC100767.1-201ENST00000528178 123 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 U7.6-201ENST00000610841 64 ntBASIC-0.58□□□□□ -2.5
SDCBPO00560 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.58□□□□□ -2.5
SDCBPO00560 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms