Protein–RNA interactions for Protein: E9PKD4

NPIPA5, Nuclear pore complex-interacting protein family member A5, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA5E9PKD4 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
NPIPA5E9PKD4 AP000753.3-201ENST00000604083 169 ntBASIC0.63□□□□□ -2.31
NPIPA5E9PKD4 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
NPIPA5E9PKD4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-34-201ENST00000362441 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-12-201ENST00000362583 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-29-201ENST00000362834 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-9-201ENST00000362912 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-21-201ENST00000362963 81 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-14-201ENST00000363090 81 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-13-201ENST00000363358 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-41-201ENST00000363608 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-11-201ENST00000363616 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-5-201ENST00000363633 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-39-201ENST00000363694 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-4-201ENST00000363810 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-16-201ENST00000363887 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-6-201ENST00000363942 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-42-201ENST00000364273 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-15-201ENST00000364809 81 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-1-201ENST00000364961 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-26-201ENST00000365067 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-10-201ENST00000365073 81 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-43-201ENST00000365503 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-36-201ENST00000365629 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 RNU6-913P-201ENST00000390913 95 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 AL138752.1-201ENST00000452964 351 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 snoU13.16-201ENST00000459350 104 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 MIR4662B-201ENST00000579498 81 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 SNORD115-40-201ENST00000606510 82 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 AL136317.1-201ENST00000612653 226 ntBASIC0.62□□□□□ -2.31
NPIPA5E9PKD4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 RNU6-110P-201ENST00000384508 104 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 MIR548A2-201ENST00000384956 97 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 MIR1827-201ENST00000408549 66 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 AC244023.1-201ENST00000426884 112 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 HMGN1P33-201ENST00000432945 451 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 RNU6-453P-201ENST00000516819 85 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 AC242498.1-201ENST00000604134 111 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.61□□□□□ -2.31
NPIPA5E9PKD4 MIR342-201ENST00000362212 99 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 Y_RNA.91-201ENST00000363042 107 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 RNU6-934P-201ENST00000365154 107 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 SNORA27-201ENST00000384323 126 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 SNORD105-201ENST00000386910 85 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 MT-TW-201ENST00000387382 68 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 RNU6-1228P-201ENST00000391014 107 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 SNORA40.5-201ENST00000391061 128 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 RNU2-70P-201ENST00000410718 179 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 AF228730.3-201ENST00000436691 102 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 AC087499.4-201ENST00000448505 178 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 Y_RNA.679-201ENST00000516416 91 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 AP000942.4-201ENST00000604811 241 ntBASIC0.6□□□□□ -2.31
NPIPA5E9PKD4 Y_RNA.11-201ENST00000362375 109 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 RNU6-1309P-201ENST00000363305 108 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 SNORA24-201ENST00000384096 131 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 Y_RNA.483-201ENST00000384380 101 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 RNU1-119P-201ENST00000391122 165 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 MIR936-201ENST00000401264 98 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 Y_RNA.590-201ENST00000410140 107 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 SNRPGP8-201ENST00000454064 226 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 RNU6-1299P-201ENST00000516316 100 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 RNU6-504P-201ENST00000516568 104 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 MIR4771-2-201ENST00000577758 74 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 MIR4771-1-201ENST00000582617 74 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.59□□□□□ -2.31
NPIPA5E9PKD4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 RNA5SP347-201ENST00000362445 119 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 RNU6-369P-201ENST00000362515 102 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 Y_RNA.199-201ENST00000364014 102 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 SNORA36.2-201ENST00000384004 127 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 MT-TN-201ENST00000387400 73 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 MIR1302-6-201ENST00000408466 90 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 RNU6-977P-201ENST00000516411 103 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 Y_RNA.720-201ENST00000517166 92 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 AL442663.2-201ENST00000554385 511 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 MIR5688-201ENST00000580619 83 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 uc_338.6-201ENST00000613544 171 ntBASIC0.58□□□□□ -2.32
NPIPA5E9PKD4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 RNU6-888P-201ENST00000363010 101 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 RNA5SP325-201ENST00000363756 130 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 Y_RNA.634-201ENST00000364811 113 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 RNU6-580P-201ENST00000365159 107 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 SNORD24-201ENST00000383884 75 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 Y_RNA.461-201ENST00000384263 103 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 SNORD38B-201ENST00000384690 67 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 MIR520F-201ENST00000384824 87 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 AL606845.1-201ENST00000404881 255 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.57□□□□□ -2.32
NPIPA5E9PKD4 RNU6-1190P-201ENST00000410811 104 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 1131.8 ms