Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 SNORA51.10-201ENST00000384418 136 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 RNU6-588P-201ENST00000410281 105 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 RPS26P48-201ENST00000491713 339 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 RNA5SP364-201ENST00000516938 78 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 AL096861.1-201ENST00000610899 123 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 Y_RNA.778-201ENST00000620203 90 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 MIR376A2-201ENST00000636782 80 ntBASIC1.55□□□□□ -2.16
MBD3L4A6NDZ8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 MIR342-201ENST00000362212 99 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 SNORA70.7-201ENST00000384159 133 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 Y_RNA.580-201ENST00000391004 95 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 AP1B1P2-201ENST00000416196 106 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 RNU7-67P-201ENST00000459003 62 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 MTND5P41-201ENST00000517498 206 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 CYP3A52P-201ENST00000563326 91 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 AC024614.2-201ENST00000577584 372 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 AC012493.3-201ENST00000604494 112 ntBASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.54□□□□□ -2.16
MBD3L4A6NDZ8 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 Y_RNA.440-201ENST00000384120 114 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 SNORA67.5-201ENST00000391036 107 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 RPS29P24-201ENST00000486345 171 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 TRMT112P2-201ENST00000512910 132 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 RNU7-70P-201ENST00000516941 66 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 RNU6-165P-201ENST00000517170 99 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 AC112693.2-201ENST00000556538 232 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 MIR4419B-201ENST00000577260 68 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 MIR3192-201ENST00000584920 77 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 AL359821.1-201ENST00000605519 182 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 AC243994.1-201ENST00000618627 109 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 MIR4251-201ENST00000635819 61 ntBASIC1.53□□□□□ -2.16
MBD3L4A6NDZ8 RNY1P10-201ENST00000363268 113 ntBASIC1.52□□□□□ -2.17
MBD3L4A6NDZ8 RPS29P29-201ENST00000456396 171 ntBASIC1.52□□□□□ -2.17
MBD3L4A6NDZ8 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
MBD3L4A6NDZ8 MIR3935-201ENST00000583472 104 ntBASIC1.52□□□□□ -2.17
MBD3L4A6NDZ8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.52□□□□□ -2.17
MBD3L4A6NDZ8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
MBD3L4A6NDZ8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.52-201ENST00000362760 96 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.170-201ENST00000363746 110 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 MIR513C-201ENST00000401352 84 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 SUMO2P12-201ENST00000405924 140 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 RNU6-958P-201ENST00000516995 106 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 RNU6-1212P-201ENST00000517023 104 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 MIR3618-201ENST00000580330 88 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 MIR8070-201ENST00000616510 88 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 MTND5P32-201ENST00000560711 1802 ntBASIC1.51□□□□□ -2.17
MBD3L4A6NDZ8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.5□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.351-201ENST00000365436 96 ntBASIC1.5□□□□□ -2.17
MBD3L4A6NDZ8 MIR499A-201ENST00000384903 122 ntBASIC1.5□□□□□ -2.17
MBD3L4A6NDZ8 RNU7-96P-201ENST00000459535 64 ntBASIC1.5□□□□□ -2.17
MBD3L4A6NDZ8 RNU6-1149P-201ENST00000516810 97 ntBASIC1.5□□□□□ -2.17
MBD3L4A6NDZ8 RNU6-255P-201ENST00000516957 105 ntBASIC1.5□□□□□ -2.17
MBD3L4A6NDZ8 AC131055.1-201ENST00000584626 316 ntBASIC1.5□□□□□ -2.17
MBD3L4A6NDZ8 AL596211.1-201ENST00000569873 2277 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 MIR302B-201ENST00000362188 73 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 SNORA25.3-201ENST00000363205 127 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.497-201ENST00000384447 98 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 RNU7-80P-201ENST00000459562 61 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 RNU6-998P-201ENST00000515894 101 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 RNU2-13P-201ENST00000515909 113 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 SNORA25.12-201ENST00000516202 82 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 RNU7-53P-201ENST00000516705 60 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 MIR8065-201ENST00000620577 100 ntBASIC1.49□□□□□ -2.17
MBD3L4A6NDZ8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.118-201ENST00000363300 101 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 RNU6-1062P-201ENST00000383908 107 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.400-201ENST00000383963 111 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.454-201ENST00000384224 113 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.508-201ENST00000384502 114 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.584-201ENST00000391090 114 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 AL035398.1-201ENST00000430869 322 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 RNU2-11P-201ENST00000459191 187 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 SNORA31.2-201ENST00000516019 134 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.48□□□□□ -2.17
MBD3L4A6NDZ8 Y_RNA.215-201ENST00000364204 112 ntBASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 SNORA25.9-201ENST00000365087 128 ntBASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 SNORA24-201ENST00000384096 131 ntBASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 AC048334.1-201ENST00000477975 159 ntBASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 RNU7-200P-201ENST00000516105 62 ntBASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 AC091932.4-201ENST00000623386 200 ntBASIC1.47□□□□□ -2.17
MBD3L4A6NDZ8 MIR103A2-201ENST00000362154 78 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 RNU1-133P-201ENST00000364867 167 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 Y_RNA.355-201ENST00000365462 98 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 RNU7-95P-201ENST00000459222 64 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 snoU13.16-201ENST00000459350 104 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 AL133373.1-201ENST00000497098 94 ntBASIC1.46□□□□□ -2.18
MBD3L4A6NDZ8 SCARNA15-202ENST00000516881 127 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms