Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC067940.1-201ENST00000458411 300 ntBASIC0.56□□□□□ -2.32
SMIM28A0A1B0GU29 MIR4711-201ENST00000578274 70 ntBASIC0.56□□□□□ -2.32
SMIM28A0A1B0GU29 AC006006.1-201ENST00000603082 144 ntBASIC0.56□□□□□ -2.32
SMIM28A0A1B0GU29 AC134878.1-201ENST00000619901 243 ntBASIC0.56□□□□□ -2.32
SMIM28A0A1B0GU29 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.56□□□□□ -2.32
SMIM28A0A1B0GU29 Y_RNA.37-201ENST00000362606 108 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 Y_RNA.66-201ENST00000362862 102 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-740P-201ENST00000364734 105 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-484P-201ENST00000384016 107 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-639P-201ENST00000384074 107 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-1067P-201ENST00000384752 107 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 MIR613-201ENST00000385248 95 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 AC244023.1-201ENST00000426884 112 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 HMGN1P33-201ENST00000432945 451 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 SNORD2.1-201ENST00000458762 69 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 MTATP8P1-201ENST00000467115 207 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-693P-201ENST00000516134 107 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 MIR4662B-201ENST00000579498 81 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 MIR4264-201ENST00000583520 66 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 AC242498.1-201ENST00000604134 111 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 U2.14-201ENST00000615943 113 ntBASIC0.55□□□□□ -2.32
SMIM28A0A1B0GU29 Y_RNA.44-201ENST00000362676 108 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-888P-201ENST00000363010 101 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 Y_RNA.376-201ENST00000365638 108 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 SNORD24-201ENST00000383884 75 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 Y_RNA.393-201ENST00000383936 102 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-1227P-201ENST00000383981 107 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 SNORA8.3-201ENST00000384679 139 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 MIR626-201ENST00000385032 94 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 SNORD105-201ENST00000386910 85 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 MT-TT-201ENST00000387460 66 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-1109P-201ENST00000391187 107 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-1190P-201ENST00000410811 104 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 snoU13.16-201ENST00000459350 104 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 TRBVB-201ENST00000477100 408 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 AC025627.3-201ENST00000582078 182 ntBASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.54□□□□□ -2.32
SMIM28A0A1B0GU29 snoU2_19.4-201ENST00000364329 80 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 MT-TW-201ENST00000387382 68 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 RNU7-67P-201ENST00000459003 62 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 RNU6-958P-201ENST00000516995 106 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 AC011195.1-201ENST00000578177 177 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 AC044792.1-201ENST00000593294 196 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 AP000753.3-201ENST00000604083 169 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 MIR6740-201ENST00000618268 113 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 AC243829.3-201ENST00000622177 108 ntBASIC0.53□□□□□ -2.32
SMIM28A0A1B0GU29 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 SNORA27-201ENST00000384323 126 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.483-201ENST00000384380 101 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 MIR216A-201ENST00000385063 110 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 AF228730.3-201ENST00000436691 102 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 AC087499.4-201ENST00000448505 178 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 RNU7-73P-201ENST00000458743 63 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 RNU7-62P-201ENST00000458856 62 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-453P-201ENST00000516819 85 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 AP003072.1-201ENST00000531740 145 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 MIR4771-2-201ENST00000577758 74 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 MIR4771-1-201ENST00000582617 74 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 MIR376A2-201ENST00000636782 80 ntBASIC0.52□□□□□ -2.33
SMIM28A0A1B0GU29 MIR1-1-201ENST00000362147 71 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.634-201ENST00000364811 113 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 SNORA40.5-201ENST00000391061 128 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 AL138752.1-201ENST00000452964 351 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 RPS29P24-201ENST00000486345 171 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-635P-201ENST00000516651 102 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 MIR5688-201ENST00000580619 83 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 AC020891.4-201ENST00000605745 93 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 MIR8055-201ENST00000610739 97 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 AL136317.1-201ENST00000612653 226 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 Z97988.1-201ENST00000637697 135 ntBASIC0.51□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.82-201ENST00000363000 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.92-201ENST00000363043 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.235-201ENST00000364412 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.306-201ENST00000365015 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.312-201ENST00000365089 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.322-201ENST00000365151 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-472P-201ENST00000384299 107 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 MIR573-201ENST00000384964 99 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 RNU6-1228P-201ENST00000391014 107 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 MIR548F4-201ENST00000408515 105 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.622-201ENST00000411091 108 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.650-201ENST00000459002 102 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 AC107297.1-201ENST00000459991 176 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
SMIM28A0A1B0GU29 Y_RNA.777-201ENST00000516982 102 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms