Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 SNORD36C-201ENST00000516733 66 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 RN7SKP295-201ENST00000517264 153 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 AC006362.1-201ENST00000567392 174 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 AC011476.5-201ENST00000615594 130 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 AL596211.1-201ENST00000569873 2277 ntBASIC-0.58□□□□□ -2.5
TRAV1-1A0A0B4J248 SNORA26.6-201ENST00000391256 115 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR876-201ENST00000401147 81 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR2053-201ENST00000459295 91 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 RPL7P42-201ENST00000481005 679 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 AC010424.1-201ENST00000506336 297 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 RNU7-161P-201ENST00000517289 62 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 AC145350.1-201ENST00000567426 208 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 MIR3681-201ENST00000580089 72 ntBASIC-0.59□□□□□ -2.5
TRAV1-1A0A0B4J248 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 U8.6-201ENST00000364939 135 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORD77.3-201ENST00000391113 65 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORD115-47-201ENST00000391226 86 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR548L-201ENST00000408303 86 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU2-66P-201ENST00000410650 161 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU2-14P-201ENST00000411053 191 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 MTND2P9-201ENST00000422293 931 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 AP003072.1-201ENST00000531740 145 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 NAMPTP3-201ENST00000569273 224 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR4790-201ENST00000577799 79 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR4423-201ENST00000580922 80 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 DEFB117-201ENST00000602356 141 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 AC105081.1-201ENST00000617727 106 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 AC090582.1-201ENST00000636321 199 ntBASIC-0.6□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORD81.1-201ENST00000363064 77 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-1042P-201ENST00000384204 107 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR548A2-201ENST00000384956 97 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNA5SP237-201ENST00000410414 113 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 BX276092.1-201ENST00000427368 251 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNA5SP67-201ENST00000516422 131 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 AC141846.1-201ENST00000568348 142 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 AC005899.2-201ENST00000584353 90 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR4263-201ENST00000584745 83 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR4436A-201ENST00000585278 85 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 AC122108.2-201ENST00000611946 526 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 AC084368.1-201ENST00000620935 65 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR6717-201ENST00000622747 73 ntBASIC-0.61□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-490P-201ENST00000362985 107 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-99P-201ENST00000364721 107 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORA69.1-201ENST00000390904 137 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORD78.2-201ENST00000391076 69 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 AC024067.1-201ENST00000426199 223 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 MTND4P19-201ENST00000446659 478 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 snoU13.11-201ENST00000459219 104 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU7-141P-201ENST00000459304 62 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU7-104P-201ENST00000459398 79 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU7-96P-201ENST00000459535 64 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-998P-201ENST00000515894 101 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU7-149P-201ENST00000516739 59 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU2-31P-201ENST00000516954 155 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 AC005357.1-201ENST00000588399 301 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 Z99129.1-201ENST00000612510 255 ntBASIC-0.62□□□□□ -2.51
TRAV1-1A0A0B4J248 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR342-201ENST00000362212 99 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORA25.7-201ENST00000364375 127 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-702P-201ENST00000364982 107 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR516B1-201ENST00000385211 90 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-531P-201ENST00000516694 104 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR4659A-201ENST00000580269 81 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR3145-201ENST00000580727 82 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 AC096720.1-201ENST00000604441 183 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 AL360085.1-201ENST00000604713 532 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 AL021707.8-201ENST00000609428 183 ntBASIC-0.63□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-653P-201ENST00000363074 106 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 SNORD110-201ENST00000408189 75 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR548K-201ENST00000408406 116 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-138P-201ENST00000515952 107 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 RNA5SP169-201ENST00000517268 117 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 AL391099.1-201ENST00000624635 187 ntBASIC-0.64□□□□□ -2.51
TRAV1-1A0A0B4J248 MIR101-2-201ENST00000362195 79 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-801P-201ENST00000364087 105 ntBASIC-0.65□□□□□ -2.51
TRAV1-1A0A0B4J248 RNU6-949P-201ENST00000384040 107 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms