Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNA5SP133-201ENST00000363368 119 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-831P-201ENST00000384548 107 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR517B-201ENST00000385102 67 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 AF228730.4-201ENST00000421457 183 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 AC093423.1-201ENST00000440817 142 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 snoU13.13-201ENST00000458842 104 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 AC022137.1-201ENST00000483735 151 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU2-31P-201ENST00000516954 155 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 YWHAEP2-201ENST00000580066 112 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 AC122108.2-201ENST00000611946 526 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR548AY-201ENST00000617669 107 ntBASIC-1.36□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-874P-201ENST00000362390 105 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD116-9-201ENST00000384000 95 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD116-3-201ENST00000384287 95 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD116-8-201ENST00000384365 95 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD116-7-201ENST00000384404 95 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD116-5-201ENST00000384462 95 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 AC140658.3-201ENST00000567603 271 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR548H5-201ENST00000580314 60 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 AC011603.4-201ENST00000611325 277 ntBASIC-1.37□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-431P-201ENST00000383874 107 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-154P-201ENST00000384306 106 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR548A2-201ENST00000384956 97 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU7-87P-201ENST00000459343 62 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR4509-3-201ENST00000578671 94 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR4509-2-201ENST00000583920 94 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 AC145423.2-201ENST00000610631 239 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR4509-1-201ENST00000618224 94 ntBASIC-1.38□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-522P-201ENST00000364497 107 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR599-201ENST00000385069 95 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR514A2-201ENST00000385131 88 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR514A3-201ENST00000385132 88 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD64-201ENST00000386683 67 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 AC083904.1-201ENST00000487828 231 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-155P-201ENST00000516347 100 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 AL080274.1-201ENST00000605565 220 ntBASIC-1.39□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 SNORD74.6-201ENST00000364796 70 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 Y_RNA.381-201ENST00000365666 102 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR147A-201ENST00000385079 72 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 AL590004.1-201ENST00000405321 300 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 AP000533.3-201ENST00000447704 118 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 MTND3P16-201ENST00000452205 344 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 RNA5SP33-201ENST00000516687 98 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 RNU7-149P-201ENST00000516739 59 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 MTND5P40-201ENST00000559945 246 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 AC004223.4-201ENST00000612426 332 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 DISC2.1-201ENST00000612827 205 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR6841-201ENST00000637129 72 ntBASIC-1.4□□□□□ -2.63
TRAV1-2A0A0B4J238 MIR20A-201ENST00000362279 71 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORA18-201ENST00000384416 132 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORD37.1-201ENST00000390968 65 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORA36B-201ENST00000410438 131 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 AL353193.1-201ENST00000421444 268 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-693P-201ENST00000516134 107 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 AP003461.1-201ENST00000528866 78 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR3913-1-201ENST00000577744 102 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 U6.109-201ENST00000636749 87 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR382-201ENST00000637119 76 ntBASIC-1.41□□□□□ -2.64
TRAV1-2A0A0B4J238 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR302B-201ENST00000362188 73 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR409-201ENST00000362237 79 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 AC091951.2-201ENST00000500762 203 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-470P-201ENST00000515954 104 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU7-10P-201ENST00000607194 63 ntBASIC-1.42□□□□□ -2.64
TRAV1-2A0A0B4J238 MIR342-201ENST00000362212 99 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 RNY1P2-201ENST00000364820 117 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 AL593851.1-201ENST00000426171 157 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 MTCO2P19-201ENST00000427513 598 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 AC098614.3-201ENST00000438957 440 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 AC097635.1-201ENST00000450678 155 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-261P-201ENST00000459506 102 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 TRAJ51-201ENST00000504127 63 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU7-13P-201ENST00000516413 62 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-706P-201ENST00000517229 104 ntBASIC-1.43□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-973P-201ENST00000364690 107 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 SNORD61-201ENST00000384252 73 ntBASIC-1.44□□□□□ -2.64
TRAV1-2A0A0B4J238 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms