Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 MIR4431-201ENST00000579990 94 ntBASIC0.09□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR5688-201ENST00000580619 83 ntBASIC0.09□□□□□ -2.4
COMMD3-BMI1R4GMX3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.09□□□□□ -2.4
COMMD3-BMI1R4GMX3 AL606534.2-204ENST00000635008 178 ntBASIC0.09□□□□□ -2.4
COMMD3-BMI1R4GMX3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.09□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.70-201ENST00000362886 110 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.222-201ENST00000364264 102 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNA5SP117-201ENST00000365294 118 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR1257-201ENST00000408490 117 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-1165P-201ENST00000410119 107 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 BTF3P11-201ENST00000426582 477 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC015818.7-201ENST00000428754 109 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 MTCO1P5-201ENST00000433573 344 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC087499.7-201ENST00000441958 109 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 MTND4LP30-201ENST00000454092 297 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-475P-201ENST00000516073 104 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 AL021707.8-201ENST00000609428 183 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC078938.1-201ENST00000620993 318 ntBASIC0.08□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.14-201ENST00000362415 103 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.136-201ENST00000363444 102 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-1205P-201ENST00000363625 106 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.248-201ENST00000364501 109 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORD116-29-201ENST00000384516 83 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR1278-201ENST00000408753 81 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 snoU13.2-201ENST00000459201 104 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU7-185P-201ENST00000459215 60 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-976P-201ENST00000516086 111 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU7-149P-201ENST00000516739 59 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORA20.3-201ENST00000516880 132 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR3145-201ENST00000580727 82 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC099654.14-201ENST00000638599 341 ntBASIC0.07□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU4-80P-201ENST00000363200 141 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORD24-201ENST00000383884 75 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-937P-201ENST00000384325 106 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORA8.2-201ENST00000384372 139 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR588-201ENST00000384900 83 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR563-201ENST00000385080 79 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU2-14P-201ENST00000411053 191 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC090844.1-201ENST00000422019 156 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU7-102P-201ENST00000458948 62 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-191P-201ENST00000516295 94 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU4-77P-201ENST00000516692 156 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-958P-201ENST00000516995 106 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-448P-201ENST00000517052 107 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC092447.9-201ENST00000603395 144 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR6718-201ENST00000616153 80 ntBASIC0.06□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNA5SP257-201ENST00000363023 116 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.142-201ENST00000363491 102 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORA1.1-201ENST00000364671 133 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORA27-201ENST00000384323 126 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.587-201ENST00000391210 103 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORA26.5-201ENST00000391215 123 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU4-30P-201ENST00000410245 143 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC073261.1-201ENST00000429409 121 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RPS29P24-201ENST00000486345 171 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-848P-201ENST00000515948 107 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-617P-201ENST00000516147 107 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-473P-201ENST00000516164 107 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-277P-201ENST00000516272 106 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU7-156P-201ENST00000517214 74 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC112693.2-201ENST00000556538 232 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 C8orf59P2-201ENST00000603441 271 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR6740-201ENST00000618268 113 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 MTND4LP32-201ENST00000636111 270 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC010332.2-201ENST00000613083 1904 ntBASIC0.05□□□□□ -2.4
COMMD3-BMI1R4GMX3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.143-201ENST00000363520 106 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR518F-201ENST00000384973 87 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU2-59P-201ENST00000410482 191 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU7-96P-201ENST00000459535 64 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORD77.4-201ENST00000516158 81 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNU6-135P-201ENST00000516769 101 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR3678-201ENST00000578455 94 ntBASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
COMMD3-BMI1R4GMX3 Y_RNA.251-201ENST00000364551 99 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 RNA5SP261-201ENST00000410536 106 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC138393.2-201ENST00000414742 246 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR4724-201ENST00000579485 89 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 SNORA25.18-201ENST00000607153 114 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC084781.2-201ENST00000615568 161 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 AC013791.1-201ENST00000616619 62 ntBASIC0.03□□□□□ -2.4
COMMD3-BMI1R4GMX3 MIR367-201ENST00000362299 68 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 SNORA63.7-201ENST00000365579 123 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 RNU6-308P-201ENST00000390957 107 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 SNORD77.3-201ENST00000391113 65 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 SNORA26-201ENST00000391286 122 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 RNU6-602P-201ENST00000411155 105 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 FGF7P4-201ENST00000509595 295 ntBASIC0.02□□□□□ -2.41
COMMD3-BMI1R4GMX3 Y_RNA.666-201ENST00000516187 112 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms