Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.15□□□□□ -2.43
USH1CQ9Y6N9 MIR4743-201ENST00000584576 69 ntBASIC-0.15□□□□□ -2.43
USH1CQ9Y6N9 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 RNU6-890P-201ENST00000384121 107 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 MIR145-201ENST00000384967 88 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 SNORA40.5-201ENST00000391061 128 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 AC002553.4-201ENST00000616896 331 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 uc_338.22-201ENST00000622722 187 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.16□□□□□ -2.44
USH1CQ9Y6N9 SNORD115-28-201ENST00000363931 81 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU6-187P-201ENST00000384139 106 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 MIR548A2-201ENST00000384956 97 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 SNORD12C-201ENST00000386307 89 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNA5SP496-201ENST00000391240 109 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 MIR1277-201ENST00000408536 78 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 AC024067.1-201ENST00000426199 223 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 MTND4P17-201ENST00000470444 350 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 AC069439.1-201ENST00000494739 167 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU7-149P-201ENST00000516739 59 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU7-30P-201ENST00000516835 62 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU6-264P-201ENST00000517134 104 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNA5SP47-201ENST00000517230 109 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 RNU1-29P-201ENST00000606574 126 ntBASIC-0.17□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 MIR610-201ENST00000385139 96 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 MIR559-201ENST00000385188 96 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 MIR548F1-201ENST00000408667 84 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 Z83846.1-201ENST00000446798 265 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 RPS29P24-201ENST00000486345 171 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 RNA5SP395-201ENST00000516567 118 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 RNU7-53P-201ENST00000516705 60 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 RNU2-31P-201ENST00000516954 155 ntBASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.18□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 RNU6-161P-201ENST00000363051 106 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 SNORA1.1-201ENST00000364671 133 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 RNU6-923P-201ENST00000364753 107 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 SNORD63-201ENST00000384262 68 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 SNORA27-201ENST00000384323 126 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 SNORA26.6-201ENST00000391256 115 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 RNU6-370P-201ENST00000411008 104 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 AC096949.1-201ENST00000412047 152 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 AL160004.2-201ENST00000432935 350 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 MTCO1P5-201ENST00000433573 344 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 RNU6-358P-201ENST00000516564 75 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 AC099654.14-201ENST00000638599 341 ntBASIC-0.19□□□□□ -2.44
USH1CQ9Y6N9 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 RNA5SP128-201ENST00000365305 116 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 MIR593-201ENST00000384856 100 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 MIR643-201ENST00000385267 97 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 SNORA26-201ENST00000391286 122 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 AC096644.2-201ENST00000429278 159 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 RNU6-469P-201ENST00000516253 101 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 SNORA31.14-201ENST00000516728 116 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 RNU6-782P-201ENST00000516852 104 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 VN1R91P-201ENST00000594377 169 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 AC080013.6-201ENST00000606185 215 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 AC011373.1-201ENST00000607270 237 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 MIR4272-201ENST00000635924 64 ntBASIC-0.2□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 SNORD28-201ENST00000384706 75 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 MIR628-201ENST00000385229 95 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 MIR760-201ENST00000390220 80 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 RNU6-308P-201ENST00000390957 107 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 RNU4-83P-201ENST00000410863 133 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 PDCL2P1-201ENST00000419302 352 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 MTND1P34-201ENST00000438556 671 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 AC099799.1-201ENST00000439809 192 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 SUMO1P3-201ENST00000439961 304 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 SNORD77.4-201ENST00000516158 81 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 SNORD36C-201ENST00000516733 66 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 RNU6-135P-201ENST00000516769 101 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 AP001282.2-201ENST00000616149 309 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 AC091304.10-201ENST00000641554 121 ntBASIC-0.21□□□□□ -2.44
USH1CQ9Y6N9 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU6-490P-201ENST00000362985 107 ntBASIC-0.22□□□□□ -2.44
USH1CQ9Y6N9 RNU4-80P-201ENST00000363200 141 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms