Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 Y_RNA.785-201ENST00000384290 109 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 MIR570-201ENST00000384917 97 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 SNORD28B-201ENST00000390993 75 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 AC087499.4-201ENST00000448505 178 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 RNU4-57P-201ENST00000515980 135 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-861P-201ENST00000516745 106 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.37-201ENST00000362606 108 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-312P-201ENST00000364629 107 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 AP1B1P2-201ENST00000416196 106 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 BTF3P4-201ENST00000418852 495 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 RNU7-120P-201ENST00000459334 63 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 Y_RNA.662-201ENST00000516028 97 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 MIR4431-201ENST00000579990 94 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 MIR3129-201ENST00000581095 76 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 AC097639.2-201ENST00000603159 172 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.35□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 MIR548A2-201ENST00000384956 97 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 AF228730.3-201ENST00000436691 102 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 SEPT7P4-201ENST00000437076 306 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 RPS29P29-201ENST00000456396 171 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 RNU6-165P-201ENST00000517170 99 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 AP003484.1-201ENST00000530974 250 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 AL096861.1-201ENST00000610899 123 ntBASIC1.34□□□□□ -2.19
CLDN16Q9Y5I7 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 SNORA1-201ENST00000384107 130 ntBASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 AC107027.2-201ENST00000512197 115 ntBASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 RNU7-41P-201ENST00000515917 61 ntBASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 MIR3668-201ENST00000582138 75 ntBASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 MIR3192-201ENST00000584920 77 ntBASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 AC008133.2-201ENST00000624540 351 ntBASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
CLDN16Q9Y5I7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 RNU6-1189P-201ENST00000383958 107 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 Y_RNA.410-201ENST00000383992 113 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 SNORA51.10-201ENST00000384418 136 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 RNU7-67P-201ENST00000459003 62 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 SNORD36C-201ENST00000516733 66 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 MIR4251-201ENST00000635819 61 ntBASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.32□□□□□ -2.2
CLDN16Q9Y5I7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 SNORA25.7-201ENST00000364375 127 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 SNORA40.5-201ENST00000391061 128 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 SNORA31.2-201ENST00000516019 134 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 RNU7-40P-201ENST00000516397 64 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 SNORA18.4-201ENST00000516440 124 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 MIR4791-201ENST00000607666 84 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 AC243994.1-201ENST00000618627 109 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 AL442644.1-201ENST00000454390 3105 ntBASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
CLDN16Q9Y5I7 MIR342-201ENST00000362212 99 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-34-201ENST00000362441 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-12-201ENST00000362583 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-29-201ENST00000362834 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-9-201ENST00000362912 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-21-201ENST00000362963 81 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-14-201ENST00000363090 81 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORA25.3-201ENST00000363205 127 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-13-201ENST00000363358 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-41-201ENST00000363608 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-11-201ENST00000363616 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-5-201ENST00000363633 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-39-201ENST00000363694 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-4-201ENST00000363810 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 RNU6-682P-201ENST00000363843 106 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-16-201ENST00000363887 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-6-201ENST00000363942 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 RNA5SP48-201ENST00000363969 126 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-42-201ENST00000364273 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 Y_RNA.240-201ENST00000364469 95 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-15-201ENST00000364809 81 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-1-201ENST00000364961 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-26-201ENST00000365067 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-10-201ENST00000365073 81 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 Y_RNA.337-201ENST00000365312 102 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-43-201ENST00000365503 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORD115-36-201ENST00000365629 82 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORA70.7-201ENST00000384159 133 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 SNORA27-201ENST00000384323 126 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 Y_RNA.537-201ENST00000384626 109 ntBASIC1.3□□□□□ -2.2
CLDN16Q9Y5I7 RNU6-938P-201ENST00000411285 103 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms