Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 SNORD37.2-201ENST00000391075 66 ntBASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-588P-201ENST00000410281 105 ntBASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 MIR4422-201ENST00000581938 83 ntBASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-34-201ENST00000362441 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-12-201ENST00000362583 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-29-201ENST00000362834 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-9-201ENST00000362912 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-21-201ENST00000362963 81 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-14-201ENST00000363090 81 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-13-201ENST00000363358 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-41-201ENST00000363608 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-11-201ENST00000363616 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-5-201ENST00000363633 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-39-201ENST00000363694 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-4-201ENST00000363810 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-16-201ENST00000363887 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-6-201ENST00000363942 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-42-201ENST00000364273 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-15-201ENST00000364809 81 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-818P-201ENST00000364837 108 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-1-201ENST00000364961 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-26-201ENST00000365067 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-10-201ENST00000365073 81 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 RNU4-11P-201ENST00000365287 132 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-43-201ENST00000365503 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-36-201ENST00000365629 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-746P-201ENST00000384112 109 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD41-201ENST00000386967 70 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNX2P2-201ENST00000424553 323 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 RNU7-43P-201ENST00000516554 64 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 RNU7-181P-201ENST00000517234 74 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 AC112693.2-201ENST00000556538 232 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 MIR548AR-201ENST00000582191 57 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 MIR5197-201ENST00000583721 112 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD115-40-201ENST00000606510 82 ntBASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-482P-201ENST00000391068 107 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 AL627390.1-201ENST00000396055 340 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD36C-201ENST00000516733 66 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 AC131055.1-201ENST00000584626 316 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 AL357312.1-201ENST00000603879 298 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 GHRLOS.1-201ENST00000610995 70 ntBASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.72□□□□□ -2.13
PCDHA3Q9Y5H8 Y_RNA.215-201ENST00000364204 112 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.251-201ENST00000364551 99 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.370-201ENST00000365589 108 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 RNU6-1336P-201ENST00000383886 109 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.440-201ENST00000384120 114 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 RNU6-1067P-201ENST00000384752 107 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 AC107297.1-201ENST00000459991 176 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 RPS26P48-201ENST00000491713 339 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 RNU2-13P-201ENST00000515909 113 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 RNU6-922P-201ENST00000516753 99 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 MIR548X2-201ENST00000579776 100 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 AL353997.5-201ENST00000618886 171 ntBASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.71□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.241-201ENST00000364470 117 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.497-201ENST00000384447 98 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 RNU6-125P-201ENST00000384505 107 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 MIR513C-201ENST00000401352 84 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 RNU7-197P-201ENST00000458836 62 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 RNA5SP445-201ENST00000515889 115 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.703-201ENST00000516846 111 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 MIR4764-201ENST00000580680 88 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 MIR376A2-201ENST00000636782 80 ntBASIC1.7□□□□□ -2.14
PCDHA3Q9Y5H8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 SNORA27-201ENST00000384323 126 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.488-201ENST00000384403 102 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.537-201ENST00000384626 109 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 MIR520C-201ENST00000385005 87 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 SNORD28B-201ENST00000390993 75 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 MIR548M-201ENST00000408260 86 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 RPL30P7-201ENST00000479312 323 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 MIR3937-201ENST00000580135 106 ntBASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.69□□□□□ -2.14
PCDHA3Q9Y5H8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.68□□□□□ -2.14
PCDHA3Q9Y5H8 CYCSP49-201ENST00000420810 319 ntBASIC1.68□□□□□ -2.14
PCDHA3Q9Y5H8 SCARNA15-202ENST00000516881 127 ntBASIC1.68□□□□□ -2.14
PCDHA3Q9Y5H8 AC019176.1-201ENST00000518519 225 ntBASIC1.68□□□□□ -2.14
PCDHA3Q9Y5H8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.68□□□□□ -2.14
PCDHA3Q9Y5H8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.68□□□□□ -2.14
PCDHA3Q9Y5H8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.52-201ENST00000362760 96 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 SNORA24-201ENST00000384096 131 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.494-201ENST00000384432 111 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 MIR569-201ENST00000385228 96 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 Y_RNA.584-201ENST00000391090 114 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 AL603908.1-201ENST00000406098 201 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 RNU6-902P-201ENST00000517212 91 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 AC090821.2-201ENST00000523552 176 ntBASIC1.67□□□□□ -2.14
PCDHA3Q9Y5H8 MIR3664-201ENST00000579074 99 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms