Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 MIR4762-201ENST00000585261 75 ntBASIC1.9□□□□□ -2.11
SCAF8Q9UPN6 AP001340.1-201ENST00000624405 217 ntBASIC1.9□□□□□ -2.11
SCAF8Q9UPN6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.9□□□□□ -2.11
SCAF8Q9UPN6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SCAF8Q9UPN6 RNU6-392P-201ENST00000364926 101 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 RNU6-53P-201ENST00000365367 106 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 snoU13.18-201ENST00000459483 104 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 SNORA31.10-201ENST00000516482 106 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 RNU6-504P-201ENST00000516568 104 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 RNU1-92P-201ENST00000517017 135 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 AC007751.1-201ENST00000529260 376 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 MIR548AI-201ENST00000579940 88 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 MIR6504-201ENST00000613520 61 ntBASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.89□□□□□ -2.11
SCAF8Q9UPN6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 SNORD50B-201ENST00000364995 70 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 SNORD61-201ENST00000384252 73 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1081P-201ENST00000384537 107 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 Y_RNA.584-201ENST00000391090 114 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 MIR1267-201ENST00000408723 78 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1211P-201ENST00000459179 105 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 RNU6-62P-201ENST00000516526 102 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 RNA5SP102-201ENST00000516865 106 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 AP001328.1-201ENST00000528550 176 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 AL365222.1-201ENST00000614661 98 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 AL157834.3-201ENST00000615543 103 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 TUG1_4.1-201ENST00000619464 181 ntBASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SCAF8Q9UPN6 Y_RNA.218-201ENST00000364218 104 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 Y_RNA.242-201ENST00000364473 110 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 RNU6-915P-201ENST00000364943 103 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 SNORD48-201ENST00000364953 64 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 SNORA4.2-201ENST00000365313 147 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 MIR539-201ENST00000365690 78 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 SNORD24-201ENST00000383884 75 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 SNORA67.6-201ENST00000391093 99 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 RNU2-51P-201ENST00000410708 197 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 STAG3L5P-204ENST00000443759 179 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 RNU7-34P-201ENST00000459394 64 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 AC008834.1-201ENST00000511612 175 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 RNU6-479P-201ENST00000516348 105 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 AL365205.2-201ENST00000594586 68 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 AC011603.4-201ENST00000611325 277 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 AL513423.1-201ENST00000621695 132 ntBASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SCAF8Q9UPN6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 RNU6-888P-201ENST00000363010 101 ntBASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 SNORA1-201ENST00000384107 130 ntBASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 MIR802-201ENST00000390235 94 ntBASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 AC131055.1-201ENST00000584626 316 ntBASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.86□□□□□ -2.11
SCAF8Q9UPN6 SNORD33-201ENST00000362761 85 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 Y_RNA.71-201ENST00000362892 104 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 SNORD14E-201ENST00000364009 85 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 SNORD114-22-201ENST00000365423 72 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 MIR194-1-201ENST00000384892 85 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 MIR548A2-201ENST00000384956 97 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 MIR624-201ENST00000385217 97 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1168P-201ENST00000390831 104 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1154P-201ENST00000391001 104 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 RNA5SP127-201ENST00000411051 133 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 AL161935.2-201ENST00000414627 60 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 SNRPGP13-201ENST00000442212 177 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 snoU13.9-201ENST00000458927 103 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 RNU6-693P-201ENST00000516134 107 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 RNU6-313P-201ENST00000516317 112 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 SNORA18.4-201ENST00000516440 124 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 Y_RNA.686-201ENST00000516548 134 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 SNORD45.4-201ENST00000516629 73 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 RNU6-1234P-201ENST00000516877 103 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 SNORA77B-201ENST00000578179 125 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 MIR3129-201ENST00000581095 76 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 U7.2-201ENST00000607576 63 ntBASIC1.85□□□□□ -2.11
SCAF8Q9UPN6 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 MIR424-201ENST00000362227 98 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 U8.1-201ENST00000362843 134 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 RNU6-442P-201ENST00000383968 104 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 SNORA22C-201ENST00000384614 134 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 SNRPGP14-201ENST00000435400 219 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 AC008267.6-201ENST00000441664 139 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 MIR4452-201ENST00000583004 71 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 AC021506.2-201ENST00000612354 169 ntBASIC1.84□□□□□ -2.11
SCAF8Q9UPN6 WWP1P1-201ENST00000466609 2769 ntBASIC1.84□□□□□ -2.12
SCAF8Q9UPN6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms