Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MTCO1P5-201ENST00000433573 344 ntBASIC0.36□□□□□ -2.35
NPIPA1Q9UND3 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
NPIPA1Q9UND3 MIR4804-201ENST00000581683 73 ntBASIC0.36□□□□□ -2.35
NPIPA1Q9UND3 MIR4676-201ENST00000583078 72 ntBASIC0.36□□□□□ -2.35
NPIPA1Q9UND3 AC020891.4-201ENST00000605745 93 ntBASIC0.36□□□□□ -2.35
NPIPA1Q9UND3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.36□□□□□ -2.35
NPIPA1Q9UND3 Y_RNA.804-201ENST00000615262 101 ntBASIC0.36□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-34-201ENST00000362441 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-12-201ENST00000362583 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-29-201ENST00000362834 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-9-201ENST00000362912 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-21-201ENST00000362963 81 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-14-201ENST00000363090 81 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-13-201ENST00000363358 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-41-201ENST00000363608 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-11-201ENST00000363616 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-5-201ENST00000363633 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-39-201ENST00000363694 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-4-201ENST00000363810 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-16-201ENST00000363887 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-6-201ENST00000363942 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-42-201ENST00000364273 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-15-201ENST00000364809 81 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-1-201ENST00000364961 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-26-201ENST00000365067 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-10-201ENST00000365073 81 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-43-201ENST00000365503 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-36-201ENST00000365629 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORA50A-201ENST00000384225 134 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 Y_RNA.569-201ENST00000384749 103 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-46-201ENST00000390982 71 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 RNA5SP496-201ENST00000391240 109 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 RNU2-70P-201ENST00000410718 179 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 MTND4LP30-201ENST00000454092 297 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 Y_RNA.715-201ENST00000517082 110 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 AL355297.3-201ENST00000604082 446 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 AC124312.5-201ENST00000604451 268 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 RAC1P9-201ENST00000604990 392 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 SNORD115-40-201ENST00000606510 82 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 AC013791.1-201ENST00000616619 62 ntBASIC0.35□□□□□ -2.35
NPIPA1Q9UND3 MIR330-201ENST00000362196 94 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 MIR367-201ENST00000362299 68 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 RNU6-1272P-201ENST00000362776 107 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 SNORD42.2-201ENST00000365570 69 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 RNY3P14-201ENST00000384309 102 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 RNU6-679P-201ENST00000391003 106 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.581-201ENST00000391017 97 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.639-201ENST00000458981 102 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 AC090971.5-201ENST00000621102 293 ntBASIC0.34□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.293-201ENST00000364908 93 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 RNU6-290P-201ENST00000365212 101 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 RNU4-45P-201ENST00000365469 141 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.431-201ENST00000384086 102 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 SNORD38B-201ENST00000384690 67 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 MIR1197-201ENST00000408818 88 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.637-201ENST00000459424 114 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 AC091959.1-201ENST00000495857 238 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 RNU6-897P-201ENST00000517135 105 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 MIR4662B-201ENST00000579498 81 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 AP000942.4-201ENST00000604811 241 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 uc_338.6-201ENST00000613544 171 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 SNORD38B-202ENST00000625943 69 ntBASIC0.33□□□□□ -2.36
NPIPA1Q9UND3 AC010332.2-201ENST00000613083 1904 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 MIR369-201ENST00000362155 70 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 RNA5SP457-201ENST00000363657 124 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 SNORD115-28-201ENST00000363931 81 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 SNORA63C-201ENST00000364578 129 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 RNU6-823P-201ENST00000391042 103 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.645-201ENST00000391229 102 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 AC087499.4-201ENST00000448505 178 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 RNU7-56P-201ENST00000458744 62 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 SNORD77.4-201ENST00000516158 81 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 AC007751.1-201ENST00000529260 376 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 MIR5692C2-201ENST00000577959 77 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 MIR4724-201ENST00000579485 89 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 AC037487.3-201ENST00000606668 112 ntBASIC0.32□□□□□ -2.36
NPIPA1Q9UND3 SNORA25.1-201ENST00000362326 128 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 RNU6-450P-201ENST00000364654 107 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 RNU6-514P-201ENST00000384208 107 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 Y_RNA.486-201ENST00000384398 107 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 RNU6-913P-201ENST00000390913 95 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 SNORA53-201ENST00000391141 249 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 MIR938-201ENST00000401216 83 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 MIR1252-201ENST00000408861 65 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 RNU6-101P-201ENST00000410323 104 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 AC022028.1-201ENST00000412054 408 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 BTF3P11-201ENST00000426582 477 ntBASIC0.31□□□□□ -2.36
NPIPA1Q9UND3 RNU7-73P-201ENST00000458743 63 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms