Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 Y_RNA.802-201ENST00000614892 130 ntBASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
SHROOM4Q9ULL8 Y_RNA.217-201ENST00000364214 105 ntBASIC1.45□□□□□ -2.18
SHROOM4Q9ULL8 RNU6-35P-201ENST00000384530 107 ntBASIC1.45□□□□□ -2.18
SHROOM4Q9ULL8 Y_RNA.641-201ENST00000459414 105 ntBASIC1.45□□□□□ -2.18
SHROOM4Q9ULL8 AC006006.1-201ENST00000603082 144 ntBASIC1.45□□□□□ -2.18
SHROOM4Q9ULL8 SNORD113.3-201ENST00000364630 78 ntBASIC1.44□□□□□ -2.18
SHROOM4Q9ULL8 RNU6-1138P-201ENST00000365359 106 ntBASIC1.44□□□□□ -2.18
SHROOM4Q9ULL8 SNORA51.10-201ENST00000384418 136 ntBASIC1.44□□□□□ -2.18
SHROOM4Q9ULL8 MIR526A2-201ENST00000390198 65 ntBASIC1.44□□□□□ -2.18
SHROOM4Q9ULL8 RNU4-57P-201ENST00000515980 135 ntBASIC1.44□□□□□ -2.18
SHROOM4Q9ULL8 AC131055.1-201ENST00000584626 316 ntBASIC1.44□□□□□ -2.18
SHROOM4Q9ULL8 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
SHROOM4Q9ULL8 Y_RNA.16-201ENST00000362421 102 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 MIR570-201ENST00000384917 97 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 RNU6-1109P-201ENST00000391187 107 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 RNU6-1203P-201ENST00000410703 110 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 U7.7-201ENST00000459276 60 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 AC023827.1-201ENST00000569247 97 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 MIR6086-201ENST00000638065 55 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 Y_RNA.294-201ENST00000364916 102 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 VTRNA1-3-201ENST00000365645 89 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 SNORA8.3-201ENST00000384679 139 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 MIR508-201ENST00000384857 115 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 Y_RNA.587-201ENST00000391210 103 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 MTCO2P24-201ENST00000515611 426 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 MIR4791-201ENST00000607666 84 ntBASIC1.43□□□□□ -2.18
SHROOM4Q9ULL8 ACA64.5-201ENST00000516207 127 ntBASIC1.42□□□□□ -2.18
SHROOM4Q9ULL8 AL442663.2-201ENST00000554385 511 ntBASIC1.42□□□□□ -2.18
SHROOM4Q9ULL8 AC025627.3-201ENST00000582078 182 ntBASIC1.42□□□□□ -2.18
SHROOM4Q9ULL8 AL021707.8-201ENST00000609428 183 ntBASIC1.42□□□□□ -2.18
SHROOM4Q9ULL8 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.42□□□□□ -2.18
SHROOM4Q9ULL8 Y_RNA.547-201ENST00000384654 119 ntBASIC1.41□□□□□ -2.18
SHROOM4Q9ULL8 RNU6-713P-201ENST00000384761 107 ntBASIC1.41□□□□□ -2.18
SHROOM4Q9ULL8 RNA5SP255-201ENST00000516370 107 ntBASIC1.41□□□□□ -2.18
SHROOM4Q9ULL8 RNU6-570P-201ENST00000517051 105 ntBASIC1.41□□□□□ -2.18
SHROOM4Q9ULL8 AC106800.4-201ENST00000614905 153 ntBASIC1.41□□□□□ -2.18
SHROOM4Q9ULL8 U6.104-201ENST00000637979 90 ntBASIC1.41□□□□□ -2.18
SHROOM4Q9ULL8 MIR608-201ENST00000384820 100 ntBASIC1.4□□□□□ -2.19
SHROOM4Q9ULL8 MIR548O-201ENST00000408583 114 ntBASIC1.4□□□□□ -2.19
SHROOM4Q9ULL8 AC098934.3-201ENST00000430450 190 ntBASIC1.4□□□□□ -2.19
SHROOM4Q9ULL8 MIR2115-201ENST00000516657 100 ntBASIC1.4□□□□□ -2.19
SHROOM4Q9ULL8 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
SHROOM4Q9ULL8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 TRBVB-201ENST00000477100 408 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-1153P-201ENST00000516760 105 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 AC100767.1-201ENST00000528178 123 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 AC004812.1-201ENST00000540773 146 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 AL008718.3-201ENST00000610217 321 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 AL136317.1-201ENST00000612653 226 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 AC243994.1-201ENST00000618627 109 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 MTND1P7-201ENST00000632801 297 ntBASIC1.39□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-211P-201ENST00000384047 107 ntBASIC1.38□□□□□ -2.19
SHROOM4Q9ULL8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.38□□□□□ -2.19
SHROOM4Q9ULL8 AC087499.4-201ENST00000448505 178 ntBASIC1.38□□□□□ -2.19
SHROOM4Q9ULL8 AC067940.1-201ENST00000458411 300 ntBASIC1.38□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-351P-201ENST00000516097 100 ntBASIC1.38□□□□□ -2.19
SHROOM4Q9ULL8 SNORD77.4-201ENST00000516158 81 ntBASIC1.38□□□□□ -2.19
SHROOM4Q9ULL8 MIR6516-201ENST00000630554 81 ntBASIC1.38□□□□□ -2.19
SHROOM4Q9ULL8 RNA5SP347-201ENST00000362445 119 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 RPS3AP1-201ENST00000413190 320 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-693P-201ENST00000516134 107 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 Y_RNA.666-201ENST00000516187 112 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-365P-201ENST00000517113 106 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 AC006504.6-201ENST00000590142 199 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 Y_RNA.24-201ENST00000362508 103 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 Y_RNA.44-201ENST00000362676 108 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-1289P-201ENST00000384431 106 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 MIR626-201ENST00000385032 94 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 MIR1302-7-201ENST00000408841 72 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 RNU2-13P-201ENST00000515909 113 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 RNU7-25P-201ENST00000516544 62 ntBASIC1.37□□□□□ -2.19
SHROOM4Q9ULL8 SNORD115-28-201ENST00000363931 81 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 SNORA26-201ENST00000391286 122 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 RNU2-64P-201ENST00000411315 191 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 MTND5P22-201ENST00000458380 195 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 RNU7-67P-201ENST00000459003 62 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 AC012433.1-201ENST00000588916 398 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 MIR6835-201ENST00000621552 64 ntBASIC1.36□□□□□ -2.19
SHROOM4Q9ULL8 Y_RNA.275-201ENST00000364726 110 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 SNORA2B-201ENST00000384583 137 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 SNORD89-201ENST00000390981 114 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 RNU2-55P-201ENST00000411146 174 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-504P-201ENST00000516568 104 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 AC013244.2-201ENST00000603396 103 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 AC096720.1-201ENST00000604441 183 ntBASIC1.35□□□□□ -2.19
SHROOM4Q9ULL8 SNORA40.5-201ENST00000391061 128 ntBASIC1.34□□□□□ -2.19
SHROOM4Q9ULL8 MIR1302-6-201ENST00000408466 90 ntBASIC1.34□□□□□ -2.19
SHROOM4Q9ULL8 MIR1197-201ENST00000408818 88 ntBASIC1.34□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-994P-201ENST00000410507 111 ntBASIC1.34□□□□□ -2.19
SHROOM4Q9ULL8 snoU13.16-201ENST00000459350 104 ntBASIC1.34□□□□□ -2.19
SHROOM4Q9ULL8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms