Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 PGBD4P5-201ENST00000445958 426 ntBASIC2.07□□□□□ -2.08
CDC42EP3Q9UKI2 RNU7-34P-201ENST00000459394 64 ntBASIC2.07□□□□□ -2.08
CDC42EP3Q9UKI2 RNU7-96P-201ENST00000459535 64 ntBASIC2.07□□□□□ -2.08
CDC42EP3Q9UKI2 SNORA31.4-201ENST00000516049 129 ntBASIC2.07□□□□□ -2.08
CDC42EP3Q9UKI2 RNU7-70P-201ENST00000516941 66 ntBASIC2.07□□□□□ -2.08
CDC42EP3Q9UKI2 MIR5092-201ENST00000583139 88 ntBASIC2.07□□□□□ -2.08
CDC42EP3Q9UKI2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CDC42EP3Q9UKI2 SNORA63.4-201ENST00000362763 126 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 Y_RNA.241-201ENST00000364470 117 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 RNU6-690P-201ENST00000365242 106 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 MIR570-201ENST00000384917 97 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 MIR136-201ENST00000385207 82 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 MIR1267-201ENST00000408723 78 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 AC093850.1-201ENST00000454121 251 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 AC234781.5-201ENST00000508429 271 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 RNU6-998P-201ENST00000515894 101 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 RNU2-13P-201ENST00000515909 113 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 SNORA31.17-201ENST00000516953 127 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 MIR4778-201ENST00000577635 80 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 MIR3683-201ENST00000580847 82 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 AC078899.2-201ENST00000595282 212 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 AL137847.3-201ENST00000611521 109 ntBASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CDC42EP3Q9UKI2 Y_RNA.198-201ENST00000364013 98 ntBASIC2.05□□□□□ -2.08
CDC42EP3Q9UKI2 MIR548A1-201ENST00000385041 97 ntBASIC2.05□□□□□ -2.08
CDC42EP3Q9UKI2 AL359511.1-201ENST00000402970 211 ntBASIC2.05□□□□□ -2.08
CDC42EP3Q9UKI2 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.05□□□□□ -2.08
CDC42EP3Q9UKI2 RPS29P24-201ENST00000486345 171 ntBASIC2.05□□□□□ -2.08
CDC42EP3Q9UKI2 RNU7-181P-201ENST00000517234 74 ntBASIC2.05□□□□□ -2.08
CDC42EP3Q9UKI2 MIR203B-201ENST00000636080 86 ntBASIC2.05□□□□□ -2.08
CDC42EP3Q9UKI2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 SNORD114-1-201ENST00000362705 72 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 Y_RNA.281-201ENST00000364774 94 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 Y_RNA.298-201ENST00000364960 107 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 SNORA1.2-201ENST00000365189 134 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 Y_RNA.338-201ENST00000365320 114 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 SNORA22-201ENST00000383907 134 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 MIR526A1-201ENST00000384897 85 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 AC090821.2-201ENST00000523552 176 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 AL391516.1-201ENST00000554380 2449 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
CDC42EP3Q9UKI2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 Y_RNA.164-201ENST00000363709 102 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 SNORA24-201ENST00000384096 131 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 MIR194-1-201ENST00000384892 85 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 MIR516B2-201ENST00000385190 85 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 RNA5SP210-201ENST00000391034 120 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 SNORD23.1-201ENST00000408212 104 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 RPL23AP42-201ENST00000471152 471 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 RNY4P20-201ENST00000516678 93 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 MIR4679-2-201ENST00000578358 77 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 AC021443.1-201ENST00000604478 211 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 SNORD3E-202ENST00000627253 216 ntBASIC2.03□□□□□ -2.08
CDC42EP3Q9UKI2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.03□□□□□ -2.09
CDC42EP3Q9UKI2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
CDC42EP3Q9UKI2 AL596211.1-201ENST00000569873 2277 ntBASIC2.02□□□□□ -2.09
CDC42EP3Q9UKI2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.02□□□□□ -2.09
CDC42EP3Q9UKI2 AC007012.1-201ENST00000567192 175 ntBASIC2.02□□□□□ -2.09
CDC42EP3Q9UKI2 MIR4305-201ENST00000583252 102 ntBASIC2.02□□□□□ -2.09
CDC42EP3Q9UKI2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-1123P-201ENST00000362347 106 ntBASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 Y_RNA.370-201ENST00000365589 108 ntBASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 AL035398.1-201ENST00000430869 322 ntBASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 AC107297.1-201ENST00000459991 176 ntBASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 AC121758.2-201ENST00000553271 193 ntBASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 HSPE1P19-201ENST00000603327 295 ntBASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
CDC42EP3Q9UKI2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 AL161935.2-201ENST00000414627 60 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 RNU7-164P-201ENST00000459221 62 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 SNORD123-201ENST00000459473 70 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 RNU7-123P-201ENST00000515911 60 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 RNU2-35P-201ENST00000516446 142 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 SUMO2P16-201ENST00000519475 264 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 MIR548AR-201ENST00000582191 57 ntBASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CDC42EP3Q9UKI2 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 AC005336.3-201ENST00000623833 2679 ntBASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-457P-201ENST00000363999 107 ntBASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 RNU6-203P-201ENST00000384038 104 ntBASIC1.99□□□□□ -2.09
CDC42EP3Q9UKI2 MT-TI-201ENST00000387365 69 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 182.4 ms