Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RNU6-102P-201ENST00000384485 104 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 MIR570-201ENST00000384917 97 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 MIR1827-201ENST00000408549 66 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 snoU13.16-201ENST00000459350 104 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 RNU7-149P-201ENST00000516739 59 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 MIR5692C2-201ENST00000577959 77 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 MIR5688-201ENST00000580619 83 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 AL355297.3-201ENST00000604082 446 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 MTND1P7-201ENST00000632801 297 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.31-201ENST00000362574 102 ntBASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.276-201ENST00000364732 109 ntBASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.509-201ENST00000384506 99 ntBASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 MIR548O-201ENST00000408583 114 ntBASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 AC087499.4-201ENST00000448505 178 ntBASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 RNU2-13P-201ENST00000515909 113 ntBASIC0.61□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-1272P-201ENST00000362776 107 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-450P-201ENST00000364654 107 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 SNORD105-201ENST00000386910 85 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 RNU2-70P-201ENST00000410718 179 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 MIR548AO-201ENST00000579992 96 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 MIR4264-201ENST00000583520 66 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 AC012433.1-201ENST00000588916 398 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 AL021707.8-201ENST00000609428 183 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 AC134503.1-201ENST00000633048 54 ntBASIC0.6□□□□□ -2.31
NPC1L1Q9UHC9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-34-201ENST00000362441 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-12-201ENST00000362583 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-29-201ENST00000362834 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-9-201ENST00000362912 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-21-201ENST00000362963 81 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-14-201ENST00000363090 81 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-13-201ENST00000363358 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-41-201ENST00000363608 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-11-201ENST00000363616 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-5-201ENST00000363633 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-39-201ENST00000363694 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-4-201ENST00000363810 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-16-201ENST00000363887 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-770P-201ENST00000363929 105 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-6-201ENST00000363942 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-42-201ENST00000364273 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-15-201ENST00000364809 81 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.293-201ENST00000364908 93 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-1-201ENST00000364961 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-26-201ENST00000365067 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-10-201ENST00000365073 81 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-43-201ENST00000365503 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-36-201ENST00000365629 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.547-201ENST00000384654 119 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 RNU1-119P-201ENST00000391122 165 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.637-201ENST00000459424 114 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 SNORD115-40-201ENST00000606510 82 ntBASIC0.59□□□□□ -2.31
NPC1L1Q9UHC9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
NPC1L1Q9UHC9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 SNORA63C-201ENST00000364578 129 ntBASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 RNU6-383P-201ENST00000410864 94 ntBASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 AC114737.2-201ENST00000421583 173 ntBASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 RNU7-25P-201ENST00000516544 62 ntBASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 Z83818.1-201ENST00000603584 150 ntBASIC0.58□□□□□ -2.32
NPC1L1Q9UHC9 Y_RNA.158-201ENST00000363651 101 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 Y_RNA.241-201ENST00000364470 117 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 RNU6-580P-201ENST00000365159 107 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 Y_RNA.455-201ENST00000384230 98 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 MIR526A2-201ENST00000390198 65 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 BTF3P11-201ENST00000426582 477 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 RNU7-67P-201ENST00000459003 62 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 RNY3P15-201ENST00000516297 97 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 SNORA27.4-201ENST00000516650 95 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 AL049861.1-201ENST00000603130 150 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 AL360085.1-201ENST00000604713 532 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 SNORD115-28-201ENST00000363931 81 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 SNORA24-201ENST00000384096 131 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 RNU6-474P-201ENST00000384243 107 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 SNORA26-201ENST00000391286 122 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 RNA5SP95-201ENST00000410319 137 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 AC091959.1-201ENST00000495857 238 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 SNORD77.4-201ENST00000516158 81 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 Y_RNA.802-201ENST00000614892 130 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 AC134878.1-201ENST00000619901 243 ntBASIC0.57□□□□□ -2.32
NPC1L1Q9UHC9 Y_RNA.19-201ENST00000362462 99 ntBASIC0.56□□□□□ -2.32
NPC1L1Q9UHC9 SNORA40.5-201ENST00000391061 128 ntBASIC0.56□□□□□ -2.32
NPC1L1Q9UHC9 AC131281.1-201ENST00000522984 164 ntBASIC0.56□□□□□ -2.32
NPC1L1Q9UHC9 AC018659.1-201ENST00000551083 169 ntBASIC0.56□□□□□ -2.32
NPC1L1Q9UHC9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.56□□□□□ -2.32
NPC1L1Q9UHC9 AC006006.1-201ENST00000603082 144 ntBASIC0.56□□□□□ -2.32
NPC1L1Q9UHC9 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
NPC1L1Q9UHC9 RNU6-934P-201ENST00000365154 107 ntBASIC0.55□□□□□ -2.32
NPC1L1Q9UHC9 MIR548P-201ENST00000408336 84 ntBASIC0.55□□□□□ -2.32
NPC1L1Q9UHC9 RNU6-121P-201ENST00000410525 99 ntBASIC0.55□□□□□ -2.32
NPC1L1Q9UHC9 AL731563.1-201ENST00000442202 214 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms