Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MIR4264-201ENST00000583520 66 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 AP000753.3-201ENST00000604083 169 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 AL133255.1-201ENST00000606374 441 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 AC013791.1-201ENST00000616619 62 ntBASIC0.32□□□□□ -2.36
CTSFQ9UBX1 RNU4-10P-201ENST00000364383 140 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 SNORD42.2-201ENST00000365570 69 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.526-201ENST00000384572 110 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.569-201ENST00000384749 103 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 RNU2-70P-201ENST00000410718 179 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 PMCHL1-202ENST00000423102 261 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 RNU7-56P-201ENST00000458744 62 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 snoU13.16-201ENST00000459350 104 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 SCARNA8-201ENST00000515924 131 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 SNORA18.4-201ENST00000516440 124 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 RNU6-958P-201ENST00000516995 106 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 MIR548S-201ENST00000581352 82 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 AC008608.1-201ENST00000603910 127 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 MIR8055-201ENST00000610739 97 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 AC134878.1-201ENST00000619901 243 ntBASIC0.31□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.445-201ENST00000384168 102 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 MIR215-201ENST00000384858 110 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 MIR518F-201ENST00000384973 87 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 RNU6-823P-201ENST00000391042 103 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 RNU6-1248P-201ENST00000391096 64 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.587-201ENST00000391210 103 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 RNU7-62P-201ENST00000458856 62 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 RNU7-67P-201ENST00000459003 62 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.3□□□□□ -2.36
CTSFQ9UBX1 MIR1273G-201ENST00000577677 100 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 AC124312.5-201ENST00000604451 268 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 AC010332.2-201ENST00000613083 1904 ntBASIC0.3□□□□□ -2.36
CTSFQ9UBX1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CTSFQ9UBX1 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-34-201ENST00000362441 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.26-201ENST00000362539 101 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-12-201ENST00000362583 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 RNU6-1272P-201ENST00000362776 107 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-29-201ENST00000362834 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-9-201ENST00000362912 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-21-201ENST00000362963 81 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 snoU2_19.2-201ENST00000363024 80 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-14-201ENST00000363090 81 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-13-201ENST00000363358 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-41-201ENST00000363608 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-11-201ENST00000363616 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-5-201ENST00000363633 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-39-201ENST00000363694 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-4-201ENST00000363810 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.183-201ENST00000363882 113 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-16-201ENST00000363887 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-6-201ENST00000363942 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-42-201ENST00000364273 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-15-201ENST00000364809 81 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-1-201ENST00000364961 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-26-201ENST00000365067 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-10-201ENST00000365073 81 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 RNU6-1138P-201ENST00000365359 106 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-43-201ENST00000365503 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-36-201ENST00000365629 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.394-201ENST00000383942 103 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 RNU6-144P-201ENST00000383951 107 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 RNU6-662P-201ENST00000384253 104 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.541-201ENST00000384640 113 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.572-201ENST00000384757 98 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD77.4-201ENST00000516158 81 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD36C-201ENST00000516733 66 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 MIR5692C2-201ENST00000577959 77 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 AP000942.4-201ENST00000604811 241 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 AL162730.1-201ENST00000605734 292 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 SNORD115-40-201ENST00000606510 82 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.804-201ENST00000615262 101 ntBASIC0.29□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.37-201ENST00000362606 108 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 RNU4-90P-201ENST00000362773 141 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 SNORD115-28-201ENST00000363931 81 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 RNU6-806P-201ENST00000365147 105 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
CTSFQ9UBX1 SNORD61-201ENST00000384252 73 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 Y_RNA.581-201ENST00000391017 97 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 RNU6-1007P-201ENST00000516586 107 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 AL008718.3-201ENST00000610217 321 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 AC090574.1-201ENST00000623186 233 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 Z97988.1-201ENST00000637697 135 ntBASIC0.28□□□□□ -2.36
CTSFQ9UBX1 MIR103A1-201ENST00000362165 78 ntBASIC0.27□□□□□ -2.37
CTSFQ9UBX1 RPL21P38-201ENST00000418090 167 ntBASIC0.27□□□□□ -2.37
CTSFQ9UBX1 ELOCP20-201ENST00000422460 345 ntBASIC0.27□□□□□ -2.37
CTSFQ9UBX1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.27□□□□□ -2.37
CTSFQ9UBX1 RNU7-73P-201ENST00000458743 63 ntBASIC0.27□□□□□ -2.37
CTSFQ9UBX1 MTCO2P24-201ENST00000515611 426 ntBASIC0.27□□□□□ -2.37
CTSFQ9UBX1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
CTSFQ9UBX1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.27□□□□□ -2.37
CTSFQ9UBX1 AL355297.3-201ENST00000604082 446 ntBASIC0.27□□□□□ -2.37
CTSFQ9UBX1 MTND4P29-201ENST00000503122 1372 ntBASIC0.27□□□□□ -2.37
CTSFQ9UBX1 Y_RNA.380-201ENST00000365663 111 ntBASIC0.26□□□□□ -2.37
CTSFQ9UBX1 RNU6-474P-201ENST00000384243 107 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms