Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC018659.1-201ENST00000551083 169 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 AL355297.3-201ENST00000604082 446 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-40-201ENST00000606510 82 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 AL160413.1-201ENST00000622780 310 ntBASIC0.45□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.241-201ENST00000364470 117 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.293-201ENST00000364908 93 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 SNORA24-201ENST00000384096 131 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.509-201ENST00000384506 99 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 MIR216A-201ENST00000385063 110 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 AC087499.4-201ENST00000448505 178 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 RNU7-67P-201ENST00000459003 62 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 AL117351.2-201ENST00000513571 157 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.666-201ENST00000516187 112 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 RNU6-126P-201ENST00000516685 103 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 AP001094.1-201ENST00000579805 193 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 MIR5688-201ENST00000580619 83 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 RN7SL793P-201ENST00000583259 296 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 AC134878.1-201ENST00000619901 243 ntBASIC0.44□□□□□ -2.34
CLCF1Q9UBD9 AL589743.1-201ENST00000551932 2712 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.105-201ENST00000363182 111 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.128-201ENST00000363391 112 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 SNORD45.3-201ENST00000363836 72 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 RNU6-770P-201ENST00000363929 105 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 SNORD115-28-201ENST00000363931 81 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 RNU6-934P-201ENST00000365154 107 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 RNU6-474P-201ENST00000384243 107 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.460-201ENST00000384255 102 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 RNU6-125P-201ENST00000384505 107 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 RNU6-205P-201ENST00000390858 107 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 RNU6-121P-201ENST00000410525 99 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 BTF3P11-201ENST00000426582 477 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 SNORD77.4-201ENST00000516158 81 ntBASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.43□□□□□ -2.34
CLCF1Q9UBD9 SNORD114-26-201ENST00000363543 72 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.276-201ENST00000364732 109 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.394-201ENST00000383942 103 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 SNORA36.2-201ENST00000384004 127 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 MIR526A2-201ENST00000390198 65 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 SNORA40.5-201ENST00000391061 128 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 MTND4LP11-201ENST00000422184 280 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 AC091959.1-201ENST00000495857 238 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 RNU6-1143P-201ENST00000516125 104 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 RNY3P15-201ENST00000516297 97 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 RNU6-977P-201ENST00000516411 103 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 SNORA27.4-201ENST00000516650 95 ntBASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.42□□□□□ -2.34
CLCF1Q9UBD9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.19-201ENST00000362462 99 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 RNU6-369P-201ENST00000362515 102 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 snoU2_19.2-201ENST00000363024 80 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.152-201ENST00000363578 100 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 SNORA63C-201ENST00000364578 129 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 RNU6-662P-201ENST00000384253 104 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.466-201ENST00000384294 113 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.494-201ENST00000384432 111 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.541-201ENST00000384640 113 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 MIR520F-201ENST00000384824 87 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 MTCO2P24-201ENST00000515611 426 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 RNU6-958P-201ENST00000516995 106 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 AP000942.4-201ENST00000604811 241 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.802-201ENST00000614892 130 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 AC134503.1-201ENST00000633048 54 ntBASIC0.41□□□□□ -2.34
CLCF1Q9UBD9 Y_RNA.158-201ENST00000363651 101 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.214-201ENST00000364201 112 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.217-201ENST00000364214 105 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.455-201ENST00000384230 98 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.486-201ENST00000384398 107 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 SNORD38B-201ENST00000384690 67 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 MIR573-201ENST00000384964 99 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.587-201ENST00000391210 103 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 SNORD83.1-201ENST00000411362 77 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 ELOCP20-201ENST00000422460 345 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 RNU7-73P-201ENST00000458743 63 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 RNU7-62P-201ENST00000458856 62 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 snoU13.21-201ENST00000459368 105 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.641-201ENST00000459414 105 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 RNU7-53P-201ENST00000516705 60 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 AC131281.1-201ENST00000522984 164 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 AC007751.1-201ENST00000529260 376 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 MIR4771-2-201ENST00000577758 74 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 MIR4771-1-201ENST00000582617 74 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 AC006006.1-201ENST00000603082 144 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 SNORD38B-202ENST00000625943 69 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
CLCF1Q9UBD9 Y_RNA.37-201ENST00000362606 108 ntBASIC0.39□□□□□ -2.35
CLCF1Q9UBD9 SNORA22B-201ENST00000383876 138 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms