Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 RNU6-111P-201ENST00000517179 105 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 AL078603.1-201ENST00000603824 313 ntBASIC1.26□□□□□ -2.21
HCN3Q9P1Z3 MIR613-201ENST00000385248 95 ntBASIC1.25□□□□□ -2.21
HCN3Q9P1Z3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
HCN3Q9P1Z3 RNU2-55P-201ENST00000411146 174 ntBASIC1.25□□□□□ -2.21
HCN3Q9P1Z3 snoU13.25-201ENST00000458945 104 ntBASIC1.25□□□□□ -2.21
HCN3Q9P1Z3 RNU4-71P-201ENST00000516258 113 ntBASIC1.25□□□□□ -2.21
HCN3Q9P1Z3 AC109810.1-201ENST00000534066 224 ntBASIC1.25□□□□□ -2.21
HCN3Q9P1Z3 MIR4251-201ENST00000635819 61 ntBASIC1.25□□□□□ -2.21
HCN3Q9P1Z3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 MIR103A2-201ENST00000362154 78 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.91-201ENST00000363042 107 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 SNORD45.3-201ENST00000363836 72 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 SNORD115-28-201ENST00000363931 81 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 RNA5SP48-201ENST00000363969 126 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 SNORD61-201ENST00000384252 73 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.626-201ENST00000411288 95 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 AC107297.1-201ENST00000459991 176 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 MIR6734-201ENST00000621166 68 ntBASIC1.24□□□□□ -2.21
HCN3Q9P1Z3 AL442644.1-201ENST00000454390 3105 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 RNA5SP264-201ENST00000363115 107 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.241-201ENST00000364470 117 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.634-201ENST00000364811 113 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 RNU6-728P-201ENST00000365375 104 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 SNORA51.10-201ENST00000384418 136 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 SNORA79-201ENST00000408376 140 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 RNU6-561P-201ENST00000516222 102 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 RNA5SP480-201ENST00000516840 109 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 RNA5SP102-201ENST00000516865 106 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 AC007751.1-201ENST00000529260 376 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 RNU2-4P-201ENST00000606190 192 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
HCN3Q9P1Z3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 RNU6-103P-201ENST00000363686 107 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 RNY1-201ENST00000364228 113 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.330-201ENST00000365230 109 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 SNORD24-201ENST00000383884 75 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 RNU6-484P-201ENST00000384016 107 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 Y_RNA.489-201ENST00000384410 101 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 SNORA80D-201ENST00000384488 135 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 SNORD58.1-201ENST00000391313 66 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 RNU6-847P-201ENST00000411115 108 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 AL121914.1-201ENST00000450188 156 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 MIR4744-201ENST00000581563 82 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 MIR4791-201ENST00000607666 84 ntBASIC1.22□□□□□ -2.21
HCN3Q9P1Z3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.7-201ENST00000362352 102 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 MIR518F-201ENST00000384973 87 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.797-201ENST00000515977 94 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 SNORD79.1-201ENST00000516069 84 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 RNA5SP153-201ENST00000516498 76 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
HCN3Q9P1Z3 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.37-201ENST00000362606 108 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 RNU6-888P-201ENST00000363010 101 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.188-201ENST00000363952 111 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.401-201ENST00000383965 117 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.537-201ENST00000384626 109 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.618-201ENST00000410949 107 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 RNU6-1271P-201ENST00000517049 105 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 AC068338.1-201ENST00000565567 176 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 AC243994.1-201ENST00000618627 109 ntBASIC1.2□□□□□ -2.22
HCN3Q9P1Z3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 SNORD114-22-201ENST00000365423 72 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 RNU4-70P-201ENST00000384579 139 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 MIR548A2-201ENST00000384956 97 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 AC087499.4-201ENST00000448505 178 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 RNU7-67P-201ENST00000459003 62 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 AP003484.1-201ENST00000530974 250 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 AC134878.1-201ENST00000619901 243 ntBASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.66-201ENST00000362862 102 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.182-201ENST00000363880 111 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 RNU6-578P-201ENST00000390980 103 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 MIR1185-1-201ENST00000408598 86 ntBASIC1.18□□□□□ -2.22
HCN3Q9P1Z3 RNU6-197P-201ENST00000516680 100 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms