Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.116-201ENST00000363292 103 ntBASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.275-201ENST00000364726 110 ntBASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 RNU6-639P-201ENST00000384074 107 ntBASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 RNU6-662P-201ENST00000384253 104 ntBASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 RNU7-67P-201ENST00000459003 62 ntBASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 RNU6-1338P-201ENST00000516328 91 ntBASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.67□□□□□ -2.3
CHCHD3Q9NX63 RNU6-888P-201ENST00000363010 101 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.84-201ENST00000363011 104 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 MIR605-201ENST00000385078 83 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 RNU1-119P-201ENST00000391122 165 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 RNU6-985P-201ENST00000410182 104 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.666-201ENST00000516187 112 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 RNU6-504P-201ENST00000516568 104 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 MIR4698-201ENST00000577795 80 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 AC012433.1-201ENST00000588916 398 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 AC044792.1-201ENST00000593294 196 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 snoU18.1-201ENST00000629629 71 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 U6.104-201ENST00000637979 90 ntBASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.66□□□□□ -2.3
CHCHD3Q9NX63 Y_RNA.153-201ENST00000363615 91 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 SNORA33.2-201ENST00000365413 134 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 MIR215-201ENST00000384858 110 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 RNU6-1203P-201ENST00000410703 110 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 RNU6-1223P-201ENST00000517124 104 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 MIR151B-201ENST00000584249 96 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 AL356055.1-201ENST00000602528 446 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 MIR6788-201ENST00000618842 66 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 uc_338.17-201ENST00000619633 179 ntBASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.11-201ENST00000362375 109 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.37-201ENST00000362606 108 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 SNORD114-22-201ENST00000365423 72 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.410-201ENST00000383992 113 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 RNU6-211P-201ENST00000384047 107 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.486-201ENST00000384398 107 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 RNA5SP95-201ENST00000410319 137 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 RNA5SP153-201ENST00000516498 76 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 AC100767.1-201ENST00000528178 123 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 AP003484.1-201ENST00000530974 250 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.122-201ENST00000363331 96 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.422-201ENST00000384054 114 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 SNORA27-201ENST00000384323 126 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 SNORD38B-201ENST00000384690 67 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 RNU6-713P-201ENST00000384761 107 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 MIR520E-201ENST00000384867 87 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 MIR518F-201ENST00000384973 87 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.604-201ENST00000410574 102 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 AC244098.3-201ENST00000424803 96 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 RPS29P24-201ENST00000486345 171 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 RNU6-693P-201ENST00000516134 107 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 AC007751.1-201ENST00000529260 376 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 Z83818.1-201ENST00000603584 150 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 SNORD38B-202ENST00000625943 69 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 Z97988.1-201ENST00000637697 135 ntBASIC0.63□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.44-201ENST00000362676 108 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.64-201ENST00000362845 102 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 RNU6-1289P-201ENST00000384431 106 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 RNU6-125P-201ENST00000384505 107 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 MIR626-201ENST00000385032 94 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 MTCYBP6-201ENST00000441810 138 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 snoU13.18-201ENST00000459483 104 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 RNU7-96P-201ENST00000459535 64 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 RNU6-1299P-201ENST00000516316 100 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 SNORA18.4-201ENST00000516440 124 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 AC097639.2-201ENST00000603159 172 ntBASIC0.62□□□□□ -2.31
CHCHD3Q9NX63 MIR335-201ENST00000362173 94 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.82-201ENST00000363000 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.92-201ENST00000363043 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 SNORD45.3-201ENST00000363836 72 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.229-201ENST00000364347 113 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.235-201ENST00000364412 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.306-201ENST00000365015 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.312-201ENST00000365089 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 RNU6-806P-201ENST00000365147 105 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.322-201ENST00000365151 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 RNU6-934P-201ENST00000365154 107 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 MIR18B-201ENST00000454574 71 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.650-201ENST00000459002 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.777-201ENST00000516982 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 CYP3A137P-201ENST00000562436 69 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 AC133485.1-201ENST00000567176 124 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 AC138907.6-201ENST00000568401 126 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 AC011195.1-201ENST00000578177 177 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 Y_RNA.771-201ENST00000598668 102 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 RMST_2.1-201ENST00000617263 136 ntBASIC0.61□□□□□ -2.31
CHCHD3Q9NX63 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms