Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-937P-201ENST00000384325 106 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-913P-201ENST00000390913 95 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 FCF1P9-201ENST00000412546 282 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 POLR2KP2-201ENST00000438155 177 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 MTND1P34-201ENST00000438556 671 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNU6-863P-201ENST00000515989 104 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 RNU7-149P-201ENST00000516739 59 ntBASIC-0.02□□□□□ -2.41
TREX1Q9NSU2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 SNORA1.1-201ENST00000364671 133 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 RNU6-876P-201ENST00000391295 104 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 SEPT7P4-201ENST00000437076 306 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 RNU7-73P-201ENST00000458743 63 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 RNU7-53P-201ENST00000516705 60 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 SNORD116.3-201ENST00000517176 78 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 AP000942.4-201ENST00000604811 241 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 AC113139.1-201ENST00000605049 239 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 MIR8055-201ENST00000610739 97 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 MTND4LP32-201ENST00000636111 270 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 Z97988.1-201ENST00000637697 135 ntBASIC-0.03□□□□□ -2.41
TREX1Q9NSU2 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 SNORD115-28-201ENST00000363931 81 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 RNY3-201ENST00000365484 102 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 SNORA26.5-201ENST00000391215 123 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 RNU2-59P-201ENST00000410482 191 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 MTND1P14-201ENST00000427400 950 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 snoU13.2-201ENST00000459201 104 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 RNU6-469P-201ENST00000516253 101 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 AL049861.1-201ENST00000603130 150 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 AC022140.2-201ENST00000623500 188 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 MIR4272-201ENST00000635924 64 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 MIR6759-201ENST00000638110 65 ntBASIC-0.04□□□□□ -2.42
TREX1Q9NSU2 SNORA42.1-201ENST00000363515 137 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 RNU6-899P-201ENST00000363947 107 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 SNORD114-9-201ENST00000364370 72 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 RNU6-308P-201ENST00000390957 107 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 SNORA40.5-201ENST00000391061 128 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 RNU6-383P-201ENST00000410864 94 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 RNU6-602P-201ENST00000411155 105 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 AC087499.4-201ENST00000448505 178 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 AL121655.1-201ENST00000605811 308 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 AC025253.1-201ENST00000613623 543 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.05□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 SNORA36.1-201ENST00000363424 132 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 RNU6-1040P-201ENST00000383974 107 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 SNORA27-201ENST00000384323 126 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 MIR644A-201ENST00000385262 94 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 SNORD12C-201ENST00000386307 89 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 AC010655.3-201ENST00000478818 450 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 MIR4290-201ENST00000583807 95 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 AC122108.2-201ENST00000611946 526 ntBASIC-0.06□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 RNU6-144P-201ENST00000383951 107 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 SNORD63-201ENST00000384262 68 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 MT-TL1-201ENST00000386347 75 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 SNORD93-201ENST00000408813 74 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 RPL39P25-201ENST00000449384 154 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 RPS29P24-201ENST00000486345 171 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 IGLVI-20-201ENST00000519296 130 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 AC007751.1-201ENST00000529260 376 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 AC104408.1-201ENST00000605241 170 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.07□□□□□ -2.42
TREX1Q9NSU2 SNORA9.1-201ENST00000362412 131 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 MT-TF-201ENST00000387314 71 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 AL512326.2-201ENST00000426359 151 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 AL160004.2-201ENST00000432935 350 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 AC069271.1-201ENST00000445577 156 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 AL138752.1-201ENST00000452964 351 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 U8.20-201ENST00000459445 131 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 SEPT14P8-201ENST00000508026 178 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 RNU6-693P-201ENST00000516134 107 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 RNA5SP227-201ENST00000516184 113 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 RNA5SP268-201ENST00000516828 124 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 AC092447.9-201ENST00000603395 144 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.08□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.09□□□□□ -2.42
TREX1Q9NSU2 Y_RNA.463-201ENST00000384271 102 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms