Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 SNORD61-201ENST00000384252 73 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.537-201ENST00000384626 109 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-493P-201ENST00000391321 108 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 AC087499.4-201ENST00000448505 178 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 MIR4744-201ENST00000581563 82 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 PRELID3BP2-201ENST00000605362 201 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 MIR8070-201ENST00000616510 88 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 MIR4251-201ENST00000635819 61 ntBASIC1.2□□□□□ -2.22
SLC6A13Q9NSD5 RNA5SP264-201ENST00000363115 107 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.121-201ENST00000363309 113 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-847P-201ENST00000411115 108 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-197P-201ENST00000516680 100 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-1270P-201ENST00000517128 108 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 AP003716.2-201ENST00000528260 108 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 AC109810.1-201ENST00000534066 224 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 MIR4421-201ENST00000578133 69 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 AL157834.3-201ENST00000615543 103 ntBASIC1.19□□□□□ -2.22
SLC6A13Q9NSD5 MIR103A2-201ENST00000362154 78 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.188-201ENST00000363952 111 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.200-201ENST00000364018 102 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-923P-201ENST00000364753 107 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 SNORA80D-201ENST00000384488 135 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 MT-TG-201ENST00000387429 68 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 SNORA79-201ENST00000408376 140 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 RNU4-43P-201ENST00000410628 137 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 RNU2-13P-201ENST00000515909 113 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 MIR4308-201ENST00000580634 81 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 MIR4791-201ENST00000607666 84 ntBASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-34-201ENST00000362441 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-12-201ENST00000362583 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.37-201ENST00000362606 108 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-29-201ENST00000362834 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-9-201ENST00000362912 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-21-201ENST00000362963 81 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-14-201ENST00000363090 81 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORA25.3-201ENST00000363205 127 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-13-201ENST00000363358 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-41-201ENST00000363608 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-11-201ENST00000363616 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-5-201ENST00000363633 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-39-201ENST00000363694 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-4-201ENST00000363810 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-16-201ENST00000363887 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-6-201ENST00000363942 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-42-201ENST00000364273 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-15-201ENST00000364809 81 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-1-201ENST00000364961 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-26-201ENST00000365067 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-10-201ENST00000365073 81 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORA25.9-201ENST00000365087 128 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-43-201ENST00000365503 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-36-201ENST00000365629 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORA51.10-201ENST00000384418 136 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 MIR499A-201ENST00000384903 122 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 MIR570-201ENST00000384917 97 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-578P-201ENST00000390980 103 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-561P-201ENST00000516222 102 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 AC009779.6-201ENST00000603972 165 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 RNU2-4P-201ENST00000606190 192 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 SNORD115-40-201ENST00000606510 82 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 AC108706.1-201ENST00000611053 297 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 AC134878.1-201ENST00000619901 243 ntBASIC1.17□□□□□ -2.22
SLC6A13Q9NSD5 MIR411-201ENST00000362239 96 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.241-201ENST00000364470 117 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.571-201ENST00000384753 98 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 AL591704.2-201ENST00000421658 181 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 AC107297.1-201ENST00000459991 176 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 RNU6-1271P-201ENST00000517049 105 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 AP003484.1-201ENST00000530974 250 ntBASIC1.16□□□□□ -2.22
SLC6A13Q9NSD5 Y_RNA.83-201ENST00000363005 113 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 RNU6-392P-201ENST00000364926 101 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 RNU4-70P-201ENST00000384579 139 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 SNORA75.2-201ENST00000391138 150 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 SNORA75.3-201ENST00000391231 150 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 MIR1185-1-201ENST00000408598 86 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 AC063976.4-201ENST00000421971 163 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 AL121914.1-201ENST00000450188 156 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 RPS26P48-201ENST00000491713 339 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 Y_RNA.797-201ENST00000515977 94 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 RNU7-40P-201ENST00000516397 64 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 RNA5SP404-201ENST00000517118 132 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 Z83818.1-201ENST00000603584 150 ntBASIC1.15□□□□□ -2.23
SLC6A13Q9NSD5 AC243994.1-201ENST00000618627 109 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms