Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU6-958P-201ENST00000516995 106 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 AC100767.1-201ENST00000528178 123 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 AC134878.1-201ENST00000619901 243 ntBASIC0.64□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-34-201ENST00000362441 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-12-201ENST00000362583 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.37-201ENST00000362606 108 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-29-201ENST00000362834 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-9-201ENST00000362912 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-21-201ENST00000362963 81 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-14-201ENST00000363090 81 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-13-201ENST00000363358 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-41-201ENST00000363608 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-11-201ENST00000363616 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-5-201ENST00000363633 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-39-201ENST00000363694 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-4-201ENST00000363810 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-16-201ENST00000363887 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-6-201ENST00000363942 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-42-201ENST00000364273 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-15-201ENST00000364809 81 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-1-201ENST00000364961 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-26-201ENST00000365067 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-10-201ENST00000365073 81 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-43-201ENST00000365503 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-36-201ENST00000365629 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 MT-TW-201ENST00000387382 68 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 MTND5P15-201ENST00000434246 349 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORA18.4-201ENST00000516440 124 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD36C-201ENST00000516733 66 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-365P-201ENST00000517113 106 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.720-201ENST00000517166 92 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 SNORD115-40-201ENST00000606510 82 ntBASIC0.63□□□□□ -2.31
EXOSC3Q9NQT5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.91-201ENST00000363042 107 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.168-201ENST00000363740 102 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.483-201ENST00000384380 101 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 MIR1827-201ENST00000408549 66 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.622-201ENST00000411091 108 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 AC015818.7-201ENST00000428754 109 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 AC087499.7-201ENST00000441958 109 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 snoU13.16-201ENST00000459350 104 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 AC113410.1-201ENST00000505029 247 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 AP003484.1-201ENST00000530974 250 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 MIR5688-201ENST00000580619 83 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 AP000753.3-201ENST00000604083 169 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 AC104465.1-201ENST00000611365 139 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 MIR6504-201ENST00000613520 61 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 U2.14-201ENST00000615943 113 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
EXOSC3Q9NQT5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 snoU2_19.4-201ENST00000364329 80 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.326-201ENST00000365176 113 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 SNORD24-201ENST00000383884 75 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.422-201ENST00000384054 114 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 SNORA24-201ENST00000384096 131 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.461-201ENST00000384263 103 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-913P-201ENST00000390913 95 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 SNORD83.1-201ENST00000411362 77 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 AC087499.4-201ENST00000448505 178 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-453P-201ENST00000516819 85 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 AC025627.3-201ENST00000582078 182 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 AC006504.6-201ENST00000590142 199 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 AP000942.4-201ENST00000604811 241 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 MIR8070-201ENST00000616510 88 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 MIR8062-201ENST00000621515 85 ntBASIC0.61□□□□□ -2.31
EXOSC3Q9NQT5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 MIR1-1-201ENST00000362147 71 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 SNORA27-201ENST00000384323 126 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-1160P-201ENST00000384546 104 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 MIR1302-6-201ENST00000408466 90 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.590-201ENST00000410140 107 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 RNU2-70P-201ENST00000410718 179 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 AF228730.3-201ENST00000436691 102 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 AL138752.1-201ENST00000452964 351 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 SNORD2.1-201ENST00000458762 69 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-1299P-201ENST00000516316 100 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 CYP3A137P-201ENST00000562436 69 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 AL136317.1-201ENST00000612653 226 ntBASIC0.6□□□□□ -2.31
EXOSC3Q9NQT5 MIR377-201ENST00000362145 69 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.4-201ENST00000362333 112 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.66-201ENST00000362862 102 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-888P-201ENST00000363010 101 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 Y_RNA.634-201ENST00000364811 113 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-484P-201ENST00000384016 107 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 MT-TN-201ENST00000387400 73 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 RNU6-1228P-201ENST00000391014 107 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 SNORA40.5-201ENST00000391061 128 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 AC244023.1-201ENST00000426884 112 ntBASIC0.59□□□□□ -2.31
EXOSC3Q9NQT5 HMGN1P33-201ENST00000432945 451 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms