Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 MIR146A-201ENST00000385201 99 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 MIR526A2-201ENST00000390198 65 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 AC004941.2-201ENST00000427009 228 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 AL118496.2-201ENST00000448300 230 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.650-201ENST00000459002 102 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 PDCD5P2-201ENST00000507570 312 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 RNU6-1045P-201ENST00000516321 107 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 RNU7-149P-201ENST00000516739 59 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.777-201ENST00000516982 102 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 MIR4764-201ENST00000580680 88 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.771-201ENST00000598668 102 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 AC006006.1-201ENST00000603082 144 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 uc_338.4-201ENST00000616635 176 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 AC015726.2-201ENST00000620112 122 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.789-201ENST00000622480 102 ntBASIC0.85□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.54-201ENST00000362766 105 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 SNORA25.3-201ENST00000363205 127 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.229-201ENST00000364347 113 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.277-201ENST00000364754 102 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 SNORD38C-201ENST00000384381 69 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 MIR942-201ENST00000401111 86 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 Y_RNA.590-201ENST00000410140 107 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 SNORD127-201ENST00000458892 86 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 RN7SKP164-201ENST00000516138 266 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 ACA64.5-201ENST00000516207 127 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 MIR548AR-201ENST00000582191 57 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 AC006441.5-201ENST00000612680 209 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 MIR6779-201ENST00000617283 64 ntBASIC0.84□□□□□ -2.27
HPS4Q9NQG7 MIR103A2-201ENST00000362154 78 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.76-201ENST00000362931 109 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 snoU2_19.4-201ENST00000364329 80 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 SNORA8.3-201ENST00000384679 139 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 MIR570-201ENST00000384917 97 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 MIR626-201ENST00000385032 94 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 MT-TT-201ENST00000387460 66 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 RNA5SP496-201ENST00000391240 109 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 MTND1P19-201ENST00000511780 315 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 SNORD77.4-201ENST00000516158 81 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.679-201ENST00000516416 91 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 RNU7-25P-201ENST00000516544 62 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 RNU7-43P-201ENST00000516554 64 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 RNU7-181P-201ENST00000517234 74 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 MIR4282-201ENST00000583613 67 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 Pinc.1-201ENST00000616452 154 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 U6.104-201ENST00000637979 90 ntBASIC0.83□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.288-201ENST00000364854 92 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.330-201ENST00000365230 109 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 RNU6-574P-201ENST00000384265 107 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.486-201ENST00000384398 107 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 MIR1185-1-201ENST00000408598 86 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.82□□□□□ -2.28
HPS4Q9NQG7 MTND3P2-201ENST00000438452 342 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.82□□□□□ -2.28
HPS4Q9NQG7 SCARNA8-201ENST00000515924 131 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 RNU4-57P-201ENST00000515980 135 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.668-201ENST00000516233 93 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 RNU6-453P-201ENST00000516819 85 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 SEPT14P17-201ENST00000617978 177 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 AL365265.1-201ENST00000621045 234 ntBASIC0.82□□□□□ -2.28
HPS4Q9NQG7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 RNU6-1138P-201ENST00000365359 106 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.352-201ENST00000365439 102 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.393-201ENST00000383936 102 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.416-201ENST00000384014 113 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.477-201ENST00000384352 108 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.562-201ENST00000384695 113 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 U8.17-201ENST00000391292 132 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 MIR548O-201ENST00000408583 114 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 AC006461.1-201ENST00000412637 326 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 AC023449.1-201ENST00000454464 154 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.81□□□□□ -2.28
HPS4Q9NQG7 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 AC007751.1-201ENST00000529260 376 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 AC011921.3-201ENST00000605540 361 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
HPS4Q9NQG7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.81□□□□□ -2.28
HPS4Q9NQG7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
HPS4Q9NQG7 RNU6-653P-201ENST00000363074 106 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 RNA5SP48-201ENST00000363969 126 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.304-201ENST00000365011 112 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.547-201ENST00000384654 119 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.8□□□□□ -2.28
HPS4Q9NQG7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.8□□□□□ -2.28
HPS4Q9NQG7 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.680-201ENST00000516441 93 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 RNU6-1007P-201ENST00000516586 107 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.8□□□□□ -2.28
HPS4Q9NQG7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 AC008133.2-201ENST00000624540 351 ntBASIC0.8□□□□□ -2.28
HPS4Q9NQG7 SNORD27-201ENST00000363981 72 ntBASIC0.79□□□□□ -2.28
HPS4Q9NQG7 Y_RNA.539-201ENST00000384635 107 ntBASIC0.79□□□□□ -2.28
HPS4Q9NQG7 MIR608-201ENST00000384820 100 ntBASIC0.79□□□□□ -2.28
HPS4Q9NQG7 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms