Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SNORA74.3-201ENST00000517108 154 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.9□□□□□ -2.11
VTA1Q9NP79 MIR3618-201ENST00000580330 88 ntBASIC1.9□□□□□ -2.11
VTA1Q9NP79 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
VTA1Q9NP79 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
VTA1Q9NP79 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
VTA1Q9NP79 SNORD1A-201ENST00000364968 72 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 RNU6-1189P-201ENST00000383958 107 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 Y_RNA.400-201ENST00000383963 111 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 SNORA40.5-201ENST00000391061 128 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 SNORD37.2-201ENST00000391075 66 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 RNA5SP247-201ENST00000411181 105 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 RPL30P7-201ENST00000479312 323 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 MIR8063-201ENST00000621930 81 ntBASIC1.89□□□□□ -2.11
VTA1Q9NP79 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
VTA1Q9NP79 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-34-201ENST00000362441 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-12-201ENST00000362583 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-29-201ENST00000362834 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-9-201ENST00000362912 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-21-201ENST00000362963 81 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-14-201ENST00000363090 81 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-13-201ENST00000363358 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-41-201ENST00000363608 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-11-201ENST00000363616 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-5-201ENST00000363633 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-39-201ENST00000363694 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-4-201ENST00000363810 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-16-201ENST00000363887 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-6-201ENST00000363942 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-42-201ENST00000364273 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-15-201ENST00000364809 81 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-1-201ENST00000364961 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-26-201ENST00000365067 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-10-201ENST00000365073 81 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-43-201ENST00000365503 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-36-201ENST00000365629 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD116-18-201ENST00000383961 92 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 RNU6-804P-201ENST00000384286 107 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 MIR516B2-201ENST00000385190 85 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 RNU6-917P-201ENST00000516294 104 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 SNORD115-40-201ENST00000606510 82 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 GHRLOS.1-201ENST00000610995 70 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 AC106754.2-201ENST00000623006 233 ntBASIC1.88□□□□□ -2.11
VTA1Q9NP79 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VTA1Q9NP79 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.87□□□□□ -2.11
VTA1Q9NP79 RNU6-818P-201ENST00000364837 108 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 SNORA70.7-201ENST00000384159 133 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 AF228730.3-201ENST00000436691 102 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 AC027119.1-201ENST00000440877 241 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 SNORD123-201ENST00000459473 70 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 RNU7-200P-201ENST00000516105 62 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 AP003484.1-201ENST00000530974 250 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 DNAJC19P9-201ENST00000555084 351 ntBASIC1.87□□□□□ -2.11
VTA1Q9NP79 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.87□□□□□ -2.11
VTA1Q9NP79 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.87□□□□□ -2.11
VTA1Q9NP79 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.86□□□□□ -2.11
VTA1Q9NP79 Y_RNA.170-201ENST00000363746 110 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 Y_RNA.370-201ENST00000365589 108 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 Y_RNA.398-201ENST00000383952 99 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 RNU6-746P-201ENST00000384112 109 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 MIR513C-201ENST00000401352 84 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 RNU6-321P-201ENST00000410912 106 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 RPL31P63-201ENST00000422565 375 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 AC005908.1-201ENST00000468701 347 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 AC092991.1-201ENST00000477176 376 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 MIR5197-201ENST00000583721 112 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 AC131055.1-201ENST00000584626 316 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 AC021753.1-201ENST00000635724 168 ntBASIC1.86□□□□□ -2.11
VTA1Q9NP79 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
VTA1Q9NP79 RNU6-151P-201ENST00000364158 107 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 SNORA1-201ENST00000384107 130 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 SNORD77.3-201ENST00000391113 65 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 RNA5SP445-201ENST00000515889 115 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 SNORA18.7-201ENST00000516910 131 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 AC112693.2-201ENST00000556538 232 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 MIR548X2-201ENST00000579776 100 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 MIR3129-201ENST00000581095 76 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 MIR4781-201ENST00000585250 76 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 AL359821.1-201ENST00000605519 182 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 AL512598.1-201ENST00000610158 273 ntBASIC1.85□□□□□ -2.11
VTA1Q9NP79 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.85□□□□□ -2.11
VTA1Q9NP79 Y_RNA.8-201ENST00000362353 102 ntBASIC1.84□□□□□ -2.11
VTA1Q9NP79 Y_RNA.537-201ENST00000384626 109 ntBASIC1.84□□□□□ -2.11
VTA1Q9NP79 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.84□□□□□ -2.11
VTA1Q9NP79 RNU7-80P-201ENST00000459562 61 ntBASIC1.84□□□□□ -2.11
VTA1Q9NP79 RNU6-255P-201ENST00000516957 105 ntBASIC1.84□□□□□ -2.11
VTA1Q9NP79 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VTA1Q9NP79 RNU6-1130P-201ENST00000365434 107 ntBASIC1.83□□□□□ -2.12
VTA1Q9NP79 Y_RNA.454-201ENST00000384224 113 ntBASIC1.83□□□□□ -2.12
VTA1Q9NP79 MTATP6P21-201ENST00000440681 189 ntBASIC1.83□□□□□ -2.12
VTA1Q9NP79 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
VTA1Q9NP79 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.83□□□□□ -2.12
VTA1Q9NP79 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
VTA1Q9NP79 AL365434.2-201ENST00000607979 234 ntBASIC1.83□□□□□ -2.12
VTA1Q9NP79 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.83□□□□□ -2.12
VTA1Q9NP79 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VTA1Q9NP79 Y_RNA.241-201ENST00000364470 117 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 7172.5 ms