Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 Y_RNA.547-201ENST00000384654 119 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.555-201ENST00000384673 110 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 RPS27P16-201ENST00000425758 201 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 AC009474.2-201ENST00000451383 136 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 MIR4498-201ENST00000577599 66 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 MIR4431-201ENST00000579990 94 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 AC098479.1-201ENST00000609225 154 ntBASIC1.35□□□□□ -2.19
UPF2Q9HAU5 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 RNU4-84P-201ENST00000364200 139 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 RNU6-312P-201ENST00000364629 107 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 RNA5SP259-201ENST00000365541 109 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 RNU6-1336P-201ENST00000383886 109 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
UPF2Q9HAU5 MIR548O-201ENST00000408583 114 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 snoU13.25-201ENST00000458945 104 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 Y_RNA.714-201ENST00000517065 90 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 MIR4662B-201ENST00000579498 81 ntBASIC1.34□□□□□ -2.19
UPF2Q9HAU5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.34□□□□□ -2.19
UPF2Q9HAU5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UPF2Q9HAU5 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 Y_RNA.494-201ENST00000384432 111 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 SNORD28B-201ENST00000390993 75 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 RNU6-394P-201ENST00000410735 107 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 RNU6-830P-201ENST00000516353 107 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 RNU7-121P-201ENST00000516604 62 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 RNU6-1270P-201ENST00000517128 108 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.33□□□□□ -2.2
UPF2Q9HAU5 FAM106DP-201ENST00000586416 501 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 MIR3658-201ENST00000636291 56 ntBASIC1.33□□□□□ -2.2
UPF2Q9HAU5 Y_RNA.180-201ENST00000363867 113 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 SNORD24-201ENST00000383884 75 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 RNU6-768P-201ENST00000384683 107 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 MIR452-201ENST00000385020 85 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 RNU2-70P-201ENST00000410718 179 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 AF228730.3-201ENST00000436691 102 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 AC023449.1-201ENST00000454464 154 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.32□□□□□ -2.2
UPF2Q9HAU5 Y_RNA.662-201ENST00000516028 97 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 RNU6-365P-201ENST00000517113 106 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 AC090049.2-201ENST00000550377 109 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 AC015726.2-201ENST00000620112 122 ntBASIC1.32□□□□□ -2.2
UPF2Q9HAU5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
UPF2Q9HAU5 RNU6-1130P-201ENST00000365434 107 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 SNORA2.2-201ENST00000365473 135 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 SNORA22-201ENST00000383907 134 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 SNORA22C-201ENST00000384614 134 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 AC006461.1-201ENST00000412637 326 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 RNU6-693P-201ENST00000516134 107 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 RNU6-922P-201ENST00000516753 99 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 MIR378D2-201ENST00000580636 98 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 MIR4295-201ENST00000585286 85 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
UPF2Q9HAU5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.3□□□□□ -2.2
UPF2Q9HAU5 Y_RNA.272-201ENST00000364696 102 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 RNU6-804P-201ENST00000384286 107 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 SNORD77.3-201ENST00000391113 65 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.3□□□□□ -2.2
UPF2Q9HAU5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.3□□□□□ -2.2
UPF2Q9HAU5 SNORD123-201ENST00000459473 70 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 SNORD36C-201ENST00000516733 66 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 RNU6-255P-201ENST00000516957 105 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 RNU7-181P-201ENST00000517234 74 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 MTND5P41-201ENST00000517498 206 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 MIR548AR-201ENST00000582191 57 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 AC104465.1-201ENST00000611365 139 ntBASIC1.3□□□□□ -2.2
UPF2Q9HAU5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
UPF2Q9HAU5 RNU6-1082P-201ENST00000364574 107 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 Y_RNA.270-201ENST00000364693 104 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 MIR136-201ENST00000385207 82 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 OR2A41P-201ENST00000473586 105 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 AC005840.1-201ENST00000498412 377 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 SNORA31.4-201ENST00000516049 129 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 RNU6-504P-201ENST00000516568 104 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 SNORA18.7-201ENST00000516910 131 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 RNU6-1212P-201ENST00000517023 104 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 SNORA74.3-201ENST00000517108 154 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 MIR3192-201ENST00000584920 77 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 AL365205.2-201ENST00000594586 68 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 AC103810.9-201ENST00000606688 112 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 AC021753.1-201ENST00000635724 168 ntBASIC1.29□□□□□ -2.2
UPF2Q9HAU5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
UPF2Q9HAU5 Y_RNA.37-201ENST00000362606 108 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 RNU6-209P-201ENST00000384118 107 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 RNU6-239P-201ENST00000390990 99 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 SNX2P2-201ENST00000424553 323 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 RNU2-13P-201ENST00000515909 113 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 MIR3129-201ENST00000581095 76 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 AL359821.1-201ENST00000605519 182 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
UPF2Q9HAU5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
UPF2Q9HAU5 MIR337-201ENST00000362281 93 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 228.1 ms