Protein–RNA interactions for Protein: Q9H9J4

USP42, Ubiquitin carboxyl-terminal hydrolase 42, humanhuman

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP42Q9H9J4 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 RNU6-740P-201ENST00000364734 105 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 SNORD12C-201ENST00000386307 89 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 RNU6-370P-201ENST00000411008 104 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 PDCL2P1-201ENST00000419302 352 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 AL589823.1-201ENST00000429577 183 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 AC107297.1-201ENST00000459991 176 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 RNU6-264P-201ENST00000517134 104 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 AC002553.4-201ENST00000616896 331 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 AC022306.2-201ENST00000617563 647 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.12□□□□□ -2.43
USP42Q9H9J4 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 SNORA72.1-201ENST00000363485 129 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 RNU6-302P-201ENST00000365249 107 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 RNU6-187P-201ENST00000384139 106 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 SNORA72.4-201ENST00000384174 132 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 AL022718.1-201ENST00000412004 84 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 RNU6-911P-201ENST00000516523 104 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.13□□□□□ -2.43
USP42Q9H9J4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.13□□□□□ -2.43
USP42Q9H9J4 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 RNU6-127P-201ENST00000390897 107 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 MIR548H2-201ENST00000408874 88 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 AC141557.1-201ENST00000540982 400 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 AC010205.1-201ENST00000616668 449 ntBASIC-0.13□□□□□ -2.43
USP42Q9H9J4 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 MIR610-201ENST00000385139 96 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 MIR559-201ENST00000385188 96 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 MIR628-201ENST00000385229 95 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 MIR1277-201ENST00000408536 78 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 RNU4-30P-201ENST00000410245 143 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 AL512326.2-201ENST00000426359 151 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 RNU7-149P-201ENST00000516739 59 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 AC131281.1-201ENST00000522984 164 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 uc_338.22-201ENST00000622722 187 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 MIR6828-201ENST00000636181 60 ntBASIC-0.14□□□□□ -2.43
USP42Q9H9J4 RNU4-80P-201ENST00000363200 141 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 SNORD115-28-201ENST00000363931 81 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 MIR145-201ENST00000384967 88 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 MIR643-201ENST00000385267 97 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 MT-TF-201ENST00000387314 71 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 SNORA40.5-201ENST00000391061 128 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 RNA5SP496-201ENST00000391240 109 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 SNORA26-201ENST00000391286 122 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 AC024067.1-201ENST00000426199 223 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 MTCO1P5-201ENST00000433573 344 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 SUMO1P3-201ENST00000439961 304 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 Z83846.1-201ENST00000446798 265 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 AL021707.8-201ENST00000609428 183 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 AC084782.3-201ENST00000612282 578 ntBASIC-0.15□□□□□ -2.43
USP42Q9H9J4 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 SNORA1.1-201ENST00000364671 133 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 SNORA27-201ENST00000384323 126 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 SNORA8.3-201ENST00000384679 139 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 MIR593-201ENST00000384856 100 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 MIR548A2-201ENST00000384956 97 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 MIR214-201ENST00000385214 110 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 AC087499.4-201ENST00000448505 178 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 RNU7-129P-201ENST00000516128 62 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 RNU6-469P-201ENST00000516253 101 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 SNORD36C-201ENST00000516733 66 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 RNU7-110P-201ENST00000516891 62 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 AC011373.1-201ENST00000607270 237 ntBASIC-0.16□□□□□ -2.44
USP42Q9H9J4 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 RNU6-308P-201ENST00000390957 107 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 SNORD93-201ENST00000408813 74 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 RNU4-83P-201ENST00000410863 133 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 RNU6-383P-201ENST00000410864 94 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 MTND1P34-201ENST00000438556 671 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 RPS29P24-201ENST00000486345 171 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 RNU6-358P-201ENST00000516564 75 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 SNORA31.14-201ENST00000516728 116 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.17□□□□□ -2.44
USP42Q9H9J4 AC122108.2-201ENST00000611946 526 ntBASIC-0.17□□□□□ -2.44
USP42Q9H9J4 AP001282.2-201ENST00000616149 309 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms