Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 RNU6-662P-201ENST00000384253 104 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 MIR520F-201ENST00000384824 87 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 MIR215-201ENST00000384858 110 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 MIR520H-201ENST00000385126 88 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 PMCHL1-202ENST00000423102 261 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 AC244023.1-201ENST00000426884 112 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 RNU6-977P-201ENST00000516411 103 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 AC007751.1-201ENST00000529260 376 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 AC242498.1-201ENST00000604134 111 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 LARP7P1-201ENST00000605576 316 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 uc_338.6-201ENST00000613544 171 ntBASIC0.5□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.293-201ENST00000364908 93 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.389-201ENST00000383924 113 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 RNA5SP496-201ENST00000391240 109 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 BTF3P11-201ENST00000426582 477 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 snoU13.16-201ENST00000459350 104 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 AC107297.1-201ENST00000459991 176 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 MIR5692C2-201ENST00000577959 77 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 MIR4264-201ENST00000583520 66 ntBASIC0.49□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.14-201ENST00000362415 103 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 RNU6-1138P-201ENST00000365359 106 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.431-201ENST00000384086 102 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 SNORA24-201ENST00000384096 131 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.581-201ENST00000391017 97 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 MIR1252-201ENST00000408861 65 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 AC134878.1-201ENST00000619901 243 ntBASIC0.48□□□□□ -2.33
RPAP3Q9H6T3 MIR330-201ENST00000362196 94 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-34-201ENST00000362441 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-12-201ENST00000362583 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-29-201ENST00000362834 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-9-201ENST00000362912 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-21-201ENST00000362963 81 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-14-201ENST00000363090 81 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-13-201ENST00000363358 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-41-201ENST00000363608 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-11-201ENST00000363616 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-5-201ENST00000363633 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-39-201ENST00000363694 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-4-201ENST00000363810 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-16-201ENST00000363887 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-6-201ENST00000363942 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-42-201ENST00000364273 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-15-201ENST00000364809 81 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-1-201ENST00000364961 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-26-201ENST00000365067 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-10-201ENST00000365073 81 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 RNU6-806P-201ENST00000365147 105 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-43-201ENST00000365503 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-36-201ENST00000365629 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 RNU6-474P-201ENST00000384243 107 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.486-201ENST00000384398 107 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 Y_RNA.541-201ENST00000384640 113 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 MIR573-201ENST00000384964 99 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 RNU6-101P-201ENST00000410323 104 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 RNU2-70P-201ENST00000410718 179 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 SNORD115-40-201ENST00000606510 82 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 MIR8087-201ENST00000612745 78 ntBASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.47□□□□□ -2.33
RPAP3Q9H6T3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 MIR367-201ENST00000362299 68 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.26-201ENST00000362539 101 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 RNU6-1272P-201ENST00000362776 107 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 SNORD115-28-201ENST00000363931 81 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 RNU6-290P-201ENST00000365212 101 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 RNU6-913P-201ENST00000390913 95 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.587-201ENST00000391210 103 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 RNU6-177P-201ENST00000411257 104 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 RPL21P38-201ENST00000418090 167 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 HMGN1P33-201ENST00000432945 451 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 RNY3P15-201ENST00000516297 97 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 MIR4724-201ENST00000579485 89 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 AC020891.4-201ENST00000605745 93 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.46□□□□□ -2.34
RPAP3Q9H6T3 MTND4P29-201ENST00000503122 1372 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 snoU2_19.2-201ENST00000363024 80 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 RNA5SP457-201ENST00000363657 124 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.572-201ENST00000384757 98 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 RNU6-938P-201ENST00000411285 103 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 AC022028.1-201ENST00000412054 408 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 ELOCP20-201ENST00000422460 345 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 RNU7-62P-201ENST00000458856 62 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 AC091959.1-201ENST00000495857 238 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 RNU6-693P-201ENST00000516134 107 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 SNORD77.4-201ENST00000516158 81 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 RNU2-31P-201ENST00000516954 155 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 AL355297.3-201ENST00000604082 446 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 AL162730.1-201ENST00000605734 292 ntBASIC0.45□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.16-201ENST00000362421 102 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.28-201ENST00000362554 111 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 AC087499.4-201ENST00000448505 178 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 AL138752.1-201ENST00000452964 351 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 SNORA18.4-201ENST00000516440 124 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 RNU6-1270P-201ENST00000517128 108 ntBASIC0.44□□□□□ -2.34
RPAP3Q9H6T3 Y_RNA.721-201ENST00000517207 102 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms