Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 MIR548O-201ENST00000408583 114 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 MTND5P15-201ENST00000434246 349 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 AC023449.1-201ENST00000454464 154 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.78□□□□□ -2.28
RNF41Q9H4P4 AC023827.1-201ENST00000569247 97 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 MIR4643-201ENST00000577473 78 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 MIR4661-201ENST00000582720 75 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 AL078603.1-201ENST00000603824 313 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.78□□□□□ -2.28
RNF41Q9H4P4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
RNF41Q9H4P4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.145-201ENST00000363527 102 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 SNORA8.3-201ENST00000384679 139 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 MIR518F-201ENST00000384973 87 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 SCARNA8-201ENST00000515924 131 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 RNA5SP255-201ENST00000516370 107 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 AL117187.1-201ENST00000555482 181 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.77□□□□□ -2.29
RNF41Q9H4P4 U2.14-201ENST00000615943 113 ntBASIC0.77□□□□□ -2.29
RNF41Q9H4P4 snoU2_19.4-201ENST00000364329 80 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 SNORA1.2-201ENST00000365189 134 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 SNORD61-201ENST00000384252 73 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 SNORA51.10-201ENST00000384418 136 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 RNU6-613P-201ENST00000410412 108 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 RNU6-847P-201ENST00000411115 108 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 SNRPGP8-201ENST00000454064 226 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 PDCD5P2-201ENST00000507570 312 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 AL442663.2-201ENST00000554385 511 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 MIR4662B-201ENST00000579498 81 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 AC008737.2-201ENST00000599446 118 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 AC006006.1-201ENST00000603082 144 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 AC011921.3-201ENST00000605540 361 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 AC243994.1-201ENST00000618627 109 ntBASIC0.76□□□□□ -2.29
RNF41Q9H4P4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.66-201ENST00000362862 102 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 SNORD24-201ENST00000383884 75 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 RNU6-484P-201ENST00000384016 107 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 RNU6-1067P-201ENST00000384752 107 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 RNU6-713P-201ENST00000384761 107 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 MT-TT-201ENST00000387460 66 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 AL358176.2-201ENST00000425769 204 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 RNA5SP220-201ENST00000516298 104 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 AC004812.1-201ENST00000540773 146 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 MIR5000-201ENST00000577717 103 ntBASIC0.75□□□□□ -2.29
RNF41Q9H4P4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
RNF41Q9H4P4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RNF41Q9H4P4 RNU6-888P-201ENST00000363010 101 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 SNORA63-201ENST00000363450 132 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 SNORD115-28-201ENST00000363931 81 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 SNORD113.3-201ENST00000364630 78 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.304-201ENST00000365011 112 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 RNU6-580P-201ENST00000365159 107 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.396-201ENST00000383949 103 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.461-201ENST00000384263 103 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 MIR518E-201ENST00000385252 88 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 MIR942-201ENST00000401111 86 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 SNORD111-201ENST00000408139 94 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 MIR1302-6-201ENST00000408466 90 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 RNA5SP95-201ENST00000410319 137 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 RNU2-55P-201ENST00000411146 174 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 AC090844.1-201ENST00000422019 156 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.74□□□□□ -2.29
RNF41Q9H4P4 AC087499.4-201ENST00000448505 178 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 RNU6-693P-201ENST00000516134 107 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 RNU6-197P-201ENST00000516680 100 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 RNU6-453P-201ENST00000516819 85 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 AC012433.1-201ENST00000588916 398 ntBASIC0.74□□□□□ -2.29
RNF41Q9H4P4 SNORD115-34-201ENST00000362441 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-12-201ENST00000362583 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 Y_RNA.37-201ENST00000362606 108 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-29-201ENST00000362834 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-9-201ENST00000362912 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-21-201ENST00000362963 81 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-14-201ENST00000363090 81 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-13-201ENST00000363358 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-41-201ENST00000363608 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-11-201ENST00000363616 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-5-201ENST00000363633 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-39-201ENST00000363694 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-4-201ENST00000363810 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD45.3-201ENST00000363836 72 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-16-201ENST00000363887 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-6-201ENST00000363942 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-42-201ENST00000364273 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-15-201ENST00000364809 81 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-1-201ENST00000364961 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-26-201ENST00000365067 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-10-201ENST00000365073 81 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-43-201ENST00000365503 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 SNORD115-36-201ENST00000365629 82 ntBASIC0.73□□□□□ -2.29
RNF41Q9H4P4 RNU6-1011P-201ENST00000384668 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms