Protein–RNA interactions for Protein: Q9H2Z4

NKX2-4, Homeobox protein Nkx-2.4, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4Q9H2Z4 AC108081.1-201ENST00000604358 221 ntBASIC2.26□□□□□ -2.05
NKX2-4Q9H2Z4 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.26□□□□□ -2.05
NKX2-4Q9H2Z4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.26□□□□□ -2.05
NKX2-4Q9H2Z4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
NKX2-4Q9H2Z4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-4Q9H2Z4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NKX2-4Q9H2Z4 SNORA1.2-201ENST00000365189 134 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 RNU1-138P-201ENST00000384093 164 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 Y_RNA.454-201ENST00000384224 113 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 SNORA27-201ENST00000384323 126 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD20-201ENST00000384550 80 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 MIR499A-201ENST00000384903 122 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 U8.17-201ENST00000391292 132 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 RNU7-181P-201ENST00000517234 74 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 IGLV3-17-201ENST00000519099 244 ntBASIC2.25□□□□□ -2.05
NKX2-4Q9H2Z4 AL442644.1-201ENST00000454390 3105 ntBASIC2.24□□□□□ -2.05
NKX2-4Q9H2Z4 MIR342-201ENST00000362212 99 ntBASIC2.24□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-457P-201ENST00000363999 107 ntBASIC2.24□□□□□ -2.05
NKX2-4Q9H2Z4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.24□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-781P-201ENST00000516377 101 ntBASIC2.24□□□□□ -2.05
NKX2-4Q9H2Z4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.24□□□□□ -2.05
NKX2-4Q9H2Z4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-34-201ENST00000362441 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-12-201ENST00000362583 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-29-201ENST00000362834 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-9-201ENST00000362912 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-21-201ENST00000362963 81 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-14-201ENST00000363090 81 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-13-201ENST00000363358 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-41-201ENST00000363608 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-11-201ENST00000363616 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-5-201ENST00000363633 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-39-201ENST00000363694 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-4-201ENST00000363810 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-16-201ENST00000363887 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-6-201ENST00000363942 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-42-201ENST00000364273 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-15-201ENST00000364809 81 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-1-201ENST00000364961 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-26-201ENST00000365067 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-10-201ENST00000365073 81 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-690P-201ENST00000365242 106 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-43-201ENST00000365503 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-36-201ENST00000365629 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-476P-201ENST00000384726 107 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 MIR489-201ENST00000384923 84 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 RNA5SP212-201ENST00000391223 107 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 Y_RNA.630-201ENST00000411370 108 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 HMGN2P35-201ENST00000412164 270 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 BTF3P4-201ENST00000418852 495 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNX2P2-201ENST00000424553 323 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 AC107297.1-201ENST00000459991 176 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 RPS26P48-201ENST00000491713 339 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 AC090821.2-201ENST00000523552 176 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 MTND5P34-201ENST00000568888 325 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 SNORD115-40-201ENST00000606510 82 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 AC025166.1-201ENST00000612411 163 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 AL137067.1-201ENST00000615933 120 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 AC010297.1-201ENST00000623948 149 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
NKX2-4Q9H2Z4 AL596211.1-201ENST00000569873 2277 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 AC008555.8-201ENST00000623602 2168 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-1325P-201ENST00000364905 105 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 Y_RNA.346-201ENST00000365385 112 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 RNA5SP182-201ENST00000516064 82 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 RNU6-240P-201ENST00000516098 97 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 AC002984.1-201ENST00000591692 448 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 AC091932.4-201ENST00000623386 200 ntBASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
NKX2-4Q9H2Z4 MIR6073-201ENST00000352083 89 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 RNU6-215P-201ENST00000365169 102 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 Y_RNA.366-201ENST00000365540 102 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 RNY1P6-201ENST00000384193 109 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 MIR526A1-201ENST00000384897 85 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 MIR1263-201ENST00000408324 86 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 AL445685.2-201ENST00000422551 342 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 RPS29P24-201ENST00000486345 171 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 SNORD33.1-201ENST00000516213 88 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 IGKV1-22-201ENST00000524313 326 ntBASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.21□□□□□ -2.06
NKX2-4Q9H2Z4 RNU6-414P-201ENST00000363705 104 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 SNORA25.9-201ENST00000365087 128 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 RNU6-203P-201ENST00000384038 104 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 RNU6-1144P-201ENST00000384247 104 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 SNORD13-201ENST00000459299 104 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 RNU7-96P-201ENST00000459535 64 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 TRMT112P2-201ENST00000512910 132 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 FAM106DP-201ENST00000586416 501 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 AL121890.5-201ENST00000620848 304 ntBASIC2.2□□□□□ -2.06
NKX2-4Q9H2Z4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.19□□□□□ -2.06
NKX2-4Q9H2Z4 MIR302B-201ENST00000362188 73 ntBASIC2.19□□□□□ -2.06
NKX2-4Q9H2Z4 RNU6-349P-201ENST00000362402 107 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms