Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 MTATP6P21-201ENST00000440681 189 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP233-201ENST00000459153 113 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 AC022217.4-201ENST00000604389 163 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 AC025166.1-201ENST00000612411 163 ntBASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
LRFN3Q9BTN0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.327-201ENST00000365201 102 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.346-201ENST00000365385 112 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 RNU6-1292P-201ENST00000383856 107 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 SNORD24-201ENST00000383884 75 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP482-201ENST00000391269 118 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 AL021397.1-201ENST00000451806 248 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.649-201ENST00000459077 103 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 AL049830.1-201ENST00000468034 425 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP236-201ENST00000516169 116 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 RNU6-1270P-201ENST00000517128 108 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP402-201ENST00000517148 110 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 IGKV1-22-201ENST00000524313 326 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 MIR6840-201ENST00000611937 71 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 MIR8054-201ENST00000620877 86 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 MTND5P18-201ENST00000445624 1801 ntBASIC2.14□□□□□ -2.07
LRFN3Q9BTN0 AC080100.1-201ENST00000624239 5356 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 RNU6-888P-201ENST00000363010 101 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 RNU6-1255P-201ENST00000363434 112 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 RNU6-392P-201ENST00000364926 101 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 RNU6-880P-201ENST00000384526 107 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 MIR548A1-201ENST00000385041 97 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 RNU6-440P-201ENST00000390882 105 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 AL034345.1-201ENST00000407768 123 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP181-201ENST00000410246 98 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 snoU13.27-201ENST00000459278 104 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.666-201ENST00000516187 112 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 MIR4709-201ENST00000577272 72 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 AC008507.4-201ENST00000585464 127 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 MIR548A2-201ENST00000384956 97 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP89-201ENST00000410300 108 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 AL445685.2-201ENST00000422551 342 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 HSPE1P9-201ENST00000440046 311 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 RNU6-168P-201ENST00000516189 101 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 SNORA31.17-201ENST00000516953 127 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 MIR4303-201ENST00000581299 66 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 MIR4713-201ENST00000582691 75 ntBASIC2.12□□□□□ -2.07
LRFN3Q9BTN0 MIR126-201ENST00000362291 85 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 RNU6-693P-201ENST00000516134 107 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 RNU6-1149P-201ENST00000516810 97 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 RNA5SP437-201ENST00000517249 129 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 MIR4299-201ENST00000577899 72 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 AL627230.6-201ENST00000611129 280 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 AL591926.4-201ENST00000616895 298 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 MIR6515-201ENST00000619843 57 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 PVT1_3.1-201ENST00000620853 95 ntBASIC2.11□□□□□ -2.07
LRFN3Q9BTN0 SNORA1B-201ENST00000362535 133 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.205-201ENST00000364128 113 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.309-201ENST00000365046 111 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 SNORD77.3-201ENST00000391113 65 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 MIR1263-201ENST00000408324 86 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 SNRPGP13-201ENST00000442212 177 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 RNU7-95P-201ENST00000459222 64 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 AC087685.1-201ENST00000587507 141 ntBASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
LRFN3Q9BTN0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 RNU6-414P-201ENST00000363705 104 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 MIR518F-201ENST00000384973 87 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 MIR522-201ENST00000385071 87 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 SNORA67.5-201ENST00000391036 107 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 AL606517.2-201ENST00000442855 241 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 SCARNA15-202ENST00000516881 127 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 SNORA44.1-201ENST00000517031 108 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 AC022254.1-201ENST00000567857 235 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 AC022709.1-201ENST00000615967 87 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
LRFN3Q9BTN0 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
LRFN3Q9BTN0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
LRFN3Q9BTN0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 RNU6-342P-201ENST00000384521 104 ntBASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 AC004965.1-201ENST00000413033 213 ntBASIC2.08□□□□□ -2.08
LRFN3Q9BTN0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms