Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 Y_RNA.280-201ENST00000364765 112 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 MIR891A-201ENST00000401237 79 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 MIR548O-201ENST00000408583 114 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AL035461.1-201ENST00000421490 332 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 CALM2P4-201ENST00000430810 426 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.69□□□□□ -2.14
MEIS3Q99687 RNU1-123P-201ENST00000458950 160 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AC114811.1-201ENST00000507207 168 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 SNORD45.4-201ENST00000516629 73 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 SNORD36C-201ENST00000516733 66 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AC024995.1-201ENST00000523014 93 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AC133485.4-201ENST00000561835 220 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 MTND5P34-201ENST00000568888 325 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AC138907.4-201ENST00000570107 226 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 Y_RNA.757-201ENST00000578934 114 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 MIR4662B-201ENST00000579498 81 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AL365205.2-201ENST00000594586 68 ntBASIC1.69□□□□□ -2.14
MEIS3Q99687 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MEIS3Q99687 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MEIS3Q99687 RNU6-888P-201ENST00000363010 101 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 RNU6-268P-201ENST00000364174 107 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 SNORD18B-201ENST00000365659 72 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 MIR518A2-201ENST00000384966 87 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 MIR624-201ENST00000385217 97 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 MIR802-201ENST00000390235 94 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 AL603914.1-201ENST00000401964 204 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.68□□□□□ -2.14
MEIS3Q99687 SNRPGP14-201ENST00000435400 219 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 RNU1-92P-201ENST00000517017 135 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 AC090049.2-201ENST00000550377 109 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.68□□□□□ -2.14
MEIS3Q99687 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.67□□□□□ -2.14
MEIS3Q99687 SNORD14E-201ENST00000364009 85 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 SNORA16B-201ENST00000364674 135 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 Y_RNA.547-201ENST00000384654 119 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 SNORA26-201ENST00000391286 122 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 RNU6-938P-201ENST00000411285 103 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 RNA5SP236-201ENST00000516169 116 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 Y_RNA.712-201ENST00000517011 92 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 RNA5SP437-201ENST00000517249 129 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 AL358944.1-201ENST00000528537 144 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 AC015726.2-201ENST00000620112 122 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 MIR3914-2-201ENST00000637339 95 ntBASIC1.67□□□□□ -2.14
MEIS3Q99687 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
MEIS3Q99687 MIRLET7C-201ENST00000362160 84 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 SNORD24-201ENST00000383884 75 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 RNU6-203P-201ENST00000384038 104 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 MIR515-2-201ENST00000384883 83 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 MIR515-1-201ENST00000384884 83 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 U8.16-201ENST00000391279 133 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 RNU6-1064P-201ENST00000410626 104 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 RNA5SP501-201ENST00000410990 112 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 AC093850.1-201ENST00000454121 251 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 RNU7-94P-201ENST00000459576 63 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 SCARNA15-202ENST00000516881 127 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 AC005786.1-201ENST00000588553 154 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 HSPE1P19-201ENST00000603327 295 ntBASIC1.66□□□□□ -2.14
MEIS3Q99687 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
MEIS3Q99687 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
MEIS3Q99687 SNORA7.1-201ENST00000363750 139 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 U8.5-201ENST00000364528 136 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 snoU2-30.1-201ENST00000365012 70 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 SNORD58C-201ENST00000365223 64 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 Y_RNA.366-201ENST00000365540 102 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 RNU6-1056P-201ENST00000383996 107 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 Y_RNA.494-201ENST00000384432 111 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 RNU6-476P-201ENST00000384726 107 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 RNY4P18-201ENST00000391107 89 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 MIR1263-201ENST00000408324 86 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 RNU6-919P-201ENST00000516731 104 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 MIR3660-201ENST00000584845 100 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 MIR4762-201ENST00000585261 75 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 AC069114.2-201ENST00000604699 304 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
MEIS3Q99687 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
MEIS3Q99687 AC008555.8-201ENST00000623602 2168 ntBASIC1.65□□□□□ -2.15
MEIS3Q99687 RNU6-1019P-201ENST00000364424 107 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 RNU6-442P-201ENST00000383968 104 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 RNU6-1144P-201ENST00000384247 104 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 RNU6-163P-201ENST00000384396 106 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 Y_RNA.563-201ENST00000384707 108 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 MIR17-201ENST00000385012 84 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 MIR548A1-201ENST00000385041 97 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 MIR29C-201ENST00000385231 88 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 Y_RNA.617-201ENST00000410920 90 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.64□□□□□ -2.15
MEIS3Q99687 RN7SKP19-201ENST00000516016 252 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 RNA5SP168-201ENST00000516642 112 ntBASIC1.64□□□□□ -2.15
MEIS3Q99687 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
MEIS3Q99687 MIR342-201ENST00000362212 99 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 Y_RNA.37-201ENST00000362606 108 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 SNORA2.2-201ENST00000365473 135 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 RNU6-1292P-201ENST00000383856 107 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 MIR516B2-201ENST00000385190 85 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 MIR758-201ENST00000390227 88 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 RNA5SP482-201ENST00000391269 118 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 AL356379.1-201ENST00000414105 126 ntBASIC1.63□□□□□ -2.15
MEIS3Q99687 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms