Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Y_RNA.323-201ENST00000365157 109 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 RNU1-109P-201ENST00000383960 147 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-1104P-201ENST00000384723 104 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 MT-TI-201ENST00000387365 69 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 SNORA26.9-201ENST00000391322 122 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 HMGN2P35-201ENST00000412164 270 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 AC087499.4-201ENST00000448505 178 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 RPL39P25-201ENST00000449384 154 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 RPPH1-2P-201ENST00000516688 293 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 RNU7-6P-201ENST00000516845 62 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 AC084364.2-201ENST00000546924 395 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 MIR5009-201ENST00000578736 100 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 AC002984.1-201ENST00000591692 448 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 AC069114.2-201ENST00000604699 304 ntBASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-640P-201ENST00000363693 105 ntBASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 RNU6-424P-201ENST00000384367 105 ntBASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 Y_RNA.544-201ENST00000384650 113 ntBASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 RN7SKP200-201ENST00000410564 320 ntBASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 BX510359.4-201ENST00000423750 193 ntBASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 MIR3163-201ENST00000581592 73 ntBASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 AC022513.1-201ENST00000624512 117 ntBASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SYNGAP1Q96PV0 Y_RNA.178-201ENST00000363832 102 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 SNORA63D-201ENST00000364359 132 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 SNORD73B-201ENST00000364394 72 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 Y_RNA.344-201ENST00000365381 112 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 SNORA27-201ENST00000384323 126 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 MIR590-201ENST00000385008 97 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 RNU11-3P-201ENST00000391111 133 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 SNORA19.1-201ENST00000410656 129 ntBASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.71□□□□□ -1.98
SYNGAP1Q96PV0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 RNU1-58P-201ENST00000362413 163 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 RNU1-17P-201ENST00000363022 152 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 MIR548D2-201ENST00000384955 97 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AL627390.1-201ENST00000396055 340 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 RNU7-26P-201ENST00000458980 63 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AC026436.1-201ENST00000510537 270 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AC024614.2-201ENST00000577584 372 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AC005786.1-201ENST00000588553 154 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AL513534.2-201ENST00000603836 250 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 RNU6-94P-201ENST00000607728 107 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AC010297.1-201ENST00000623948 149 ntBASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SYNGAP1Q96PV0 SNORA38-201ENST00000363946 132 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 Y_RNA.224-201ENST00000364308 111 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 MIR597-201ENST00000384968 97 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 AC108667.1-201ENST00000428618 249 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 AL035398.1-201ENST00000430869 322 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 RNU2-35P-201ENST00000516446 142 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 RNU7-181P-201ENST00000517234 74 ntBASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SYNGAP1Q96PV0 MIR29C-201ENST00000385231 88 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 AL034345.1-201ENST00000407768 123 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 MIR1267-201ENST00000408723 78 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 RNU2-7P-201ENST00000410794 178 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 AC015922.2-201ENST00000435593 184 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 RNU7-12P-201ENST00000516030 62 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 AC078899.2-201ENST00000595282 212 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 RNU6-49P-201ENST00000384256 107 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 HSPE1P9-201ENST00000440046 311 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 SNORA31.10-201ENST00000516482 106 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 AC090821.2-201ENST00000523552 176 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 AL359821.1-201ENST00000605519 182 ntBASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SYNGAP1Q96PV0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 MIR516B2-201ENST00000385190 85 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 RNU6-816P-201ENST00000390914 107 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 RNU6-1268P-201ENST00000391214 107 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 U8.16-201ENST00000391279 133 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 RNU6-1239P-201ENST00000391310 107 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 AL022718.1-201ENST00000412004 84 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 MIR3683-201ENST00000580847 82 ntBASIC2.67□□□□□ -1.98
SYNGAP1Q96PV0 MIR5007-201ENST00000583098 95 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms