Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.12□□□□□ -1.91
TRERF1Q96PN7 RNU4-82P-201ENST00000362443 140 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 RNU6-862P-201ENST00000362804 105 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 SNORD115-2-201ENST00000362842 82 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 SNORD115-20-201ENST00000365099 82 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 Y_RNA.430-201ENST00000384081 110 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 RNA5SP482-201ENST00000391269 118 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 Y_RNA.607-201ENST00000410597 98 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 SRIP3-201ENST00000413200 219 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 AC090844.1-201ENST00000422019 156 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.12□□□□□ -1.91
TRERF1Q96PN7 AC003982.1-202ENST00000469928 248 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 RNA5SP33-201ENST00000516687 98 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 RNU6-826P-201ENST00000516827 104 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 AC024995.1-201ENST00000523014 93 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 AL356280.1-201ENST00000603614 379 ntBASIC3.12□□□□□ -1.91
TRERF1Q96PN7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.12□□□□□ -1.91
TRERF1Q96PN7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
TRERF1Q96PN7 MIR26A1-201ENST00000362205 77 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-34-201ENST00000362441 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-12-201ENST00000362583 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-29-201ENST00000362834 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-9-201ENST00000362912 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-21-201ENST00000362963 81 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-14-201ENST00000363090 81 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-41-201ENST00000363608 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-11-201ENST00000363616 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-5-201ENST00000363633 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-39-201ENST00000363694 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-4-201ENST00000363810 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-6-201ENST00000363942 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-42-201ENST00000364273 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORA1.1-201ENST00000364671 133 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-15-201ENST00000364809 81 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-26-201ENST00000365067 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-10-201ENST00000365073 81 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-43-201ENST00000365503 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD115-36-201ENST00000365629 82 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 RNU6-301P-201ENST00000384277 107 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 RNA5SP109-201ENST00000391010 116 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 SNORD77B-201ENST00000391112 67 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 HMGN2P35-201ENST00000412164 270 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 AC245047.3-201ENST00000429428 127 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.11□□□□□ -1.91
TRERF1Q96PN7 CYP2C59P-201ENST00000457790 269 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 UBL5P1-201ENST00000507979 193 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 AC108729.3-201ENST00000513484 108 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 RNU6-86P-201ENST00000606534 107 ntBASIC3.11□□□□□ -1.91
TRERF1Q96PN7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.11□□□□□ -1.91
TRERF1Q96PN7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.1□□□□□ -1.91
TRERF1Q96PN7 RNU6-633P-201ENST00000362612 103 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 SNORD115-27-201ENST00000364430 82 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 Y_RNA.609-201ENST00000410669 89 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.1□□□□□ -1.91
TRERF1Q96PN7 RN7SL429P-201ENST00000479090 223 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 RN7SL489P-201ENST00000486185 223 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 RN7SL327P-201ENST00000488659 223 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 AC096720.1-201ENST00000604441 183 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 RN7SL853P-201ENST00000617250 223 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 SEPT14P17-201ENST00000617978 177 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 MIR6841-201ENST00000637129 72 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
TRERF1Q96PN7 AL355596.1-201ENST00000565399 3996 ntBASIC3.1□□□□□ -1.91
TRERF1Q96PN7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TRERF1Q96PN7 MIRLET7C-201ENST00000362160 84 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 SNORA22.1-201ENST00000362701 134 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNA5SP68-201ENST00000363885 119 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 SNORA25B-201ENST00000365507 128 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 SNORA32-201ENST00000384072 121 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNU6-163P-201ENST00000384396 106 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNU6-1319P-201ENST00000390855 104 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNU6-747P-201ENST00000390928 104 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNU6-241P-201ENST00000391148 104 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNU6-1190P-201ENST00000410811 104 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNU6-177P-201ENST00000411257 104 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RN7SKP192-201ENST00000411291 327 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 AC003685.2-201ENST00000422795 395 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 CST2P1-201ENST00000425770 87 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RPS12P2-201ENST00000439728 269 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 STAG3L5P-204ENST00000443759 179 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 MIR4439-201ENST00000583746 80 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 AC022202.1-201ENST00000613515 211 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 AC005336.3-201ENST00000623833 2679 ntBASIC3.09□□□□□ -1.91
TRERF1Q96PN7 RNU6-1163P-201ENST00000364516 107 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 MIR515-2-201ENST00000384883 83 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 MIR515-1-201ENST00000384884 83 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 RNU6-1307P-201ENST00000391012 103 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 MIR1262-201ENST00000408276 93 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 RNU7-34P-201ENST00000459394 64 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 RN7SL636P-201ENST00000497504 294 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 RNU6-1006P-201ENST00000516998 103 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 IGLV3-17-201ENST00000519099 244 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC3.08□□□□□ -1.92
TRERF1Q96PN7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.08□□□□□ -1.92
TRERF1Q96PN7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRERF1Q96PN7 AL442644.1-201ENST00000454390 3105 ntBASIC3.08□□□□□ -1.92
TRERF1Q96PN7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRERF1Q96PN7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TRERF1Q96PN7 SNORD115-3-201ENST00000363100 82 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms