Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 MIR6844-201ENST00000637122 62 ntBASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 RNU6-978P-201ENST00000364371 103 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 SNORD61-201ENST00000384252 73 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.488-201ENST00000384403 102 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 RNU6-950P-201ENST00000384651 107 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 SNORA20-201ENST00000384662 132 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 AC093850.1-201ENST00000454121 251 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 RNU7-12P-201ENST00000516030 62 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 AP000648.3-201ENST00000623539 4507 ntBASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
FOXN4Q96NZ1 RNU6-442P-201ENST00000383968 104 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 SNORA1-201ENST00000384107 130 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 RNU6-424P-201ENST00000384367 105 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 SNORA26-201ENST00000391286 122 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 MIR1287-201ENST00000408492 90 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 AC245517.4-201ENST00000448601 281 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 RNU6-693P-201ENST00000516134 107 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 RNU6-426P-201ENST00000516464 97 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 RNA5SP481-201ENST00000516814 122 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 RNU6-902P-201ENST00000517212 91 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 AC112693.2-201ENST00000556538 232 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 MIR4778-201ENST00000577635 80 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 MIR3129-201ENST00000581095 76 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 AC087685.1-201ENST00000587507 141 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 AC097639.2-201ENST00000603159 172 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 MIR8063-201ENST00000621930 81 ntBASIC1.25□□□□□ -2.21
FOXN4Q96NZ1 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 RNU6-268P-201ENST00000364174 107 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.343-201ENST00000365354 112 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 MIR569-201ENST00000385228 96 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 MIR513C-201ENST00000401352 84 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 CYCTP-201ENST00000504253 315 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 RNU7-25P-201ENST00000516544 62 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 RNU6-504P-201ENST00000516568 104 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 AC007751.1-201ENST00000529260 376 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 MIR548X2-201ENST00000579776 100 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 MIR8070-201ENST00000616510 88 ntBASIC1.24□□□□□ -2.21
FOXN4Q96NZ1 SNORA25.7-201ENST00000364375 127 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 RNU6-597P-201ENST00000365620 102 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 RNU6-203P-201ENST00000384038 104 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.497-201ENST00000384447 98 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 MIR548A2-201ENST00000384956 97 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 RNU6-460P-201ENST00000391158 108 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 MIR548O-201ENST00000408583 114 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 SNRPGP14-201ENST00000435400 219 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 RNU6-126P-201ENST00000516685 103 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 MIR3910-1-201ENST00000580936 111 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 AL157834.3-201ENST00000615543 103 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 AC095038.3-201ENST00000634439 195 ntBASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.23□□□□□ -2.21
FOXN4Q96NZ1 RNU6-704P-201ENST00000364162 103 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 Y_RNA.568-201ENST00000384742 113 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 MIR518F-201ENST00000384973 87 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 MIR516B2-201ENST00000385190 85 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 MIR613-201ENST00000385248 95 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 RNU6-360P-201ENST00000390944 104 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 SNORA75.5-201ENST00000391291 81 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 MIR891A-201ENST00000401237 79 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 PGBD4P5-201ENST00000445958 426 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 AL392103.1-201ENST00000447000 198 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 AC092991.1-201ENST00000477176 376 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 SNORA18.4-201ENST00000516440 124 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 SNORA77B-201ENST00000578179 125 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 MIR3646-201ENST00000578301 84 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 AC006441.5-201ENST00000612680 209 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 AC015726.2-201ENST00000620112 122 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 AC027279.3-201ENST00000625055 122 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 SNORD3E-202ENST00000627253 216 ntBASIC1.22□□□□□ -2.21
FOXN4Q96NZ1 RNU6-888P-201ENST00000363010 101 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.242-201ENST00000364473 110 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.420-201ENST00000384043 110 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 MIR660-201ENST00000385235 97 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 AF228730.3-201ENST00000436691 102 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 HMGN2P32-201ENST00000444648 269 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 RNU7-197P-201ENST00000458836 62 ntBASIC1.21□□□□□ -2.22
FOXN4Q96NZ1 AC090142.3-201ENST00000519012 385 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 255.4 ms