Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 RNA5SP133-201ENST00000363368 119 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
SPG11Q96JI7 MIR190B-201ENST00000401119 79 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 SNORA25.14-201ENST00000516481 132 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 AC145350.1-201ENST00000567426 208 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 MIR3684-201ENST00000579779 74 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 JPX_2.1-201ENST00000614161 69 ntBASIC-1.25□□□□□ -2.61
SPG11Q96JI7 Y_RNA.22-201ENST00000362492 102 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 RNY1P2-201ENST00000364820 117 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 RNU6-61P-201ENST00000365528 109 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 RNU6-746P-201ENST00000384112 109 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 MIR320B2-201ENST00000408479 138 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AC073464.1-201ENST00000429823 534 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AC008507.2-201ENST00000588402 1176 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AC002044.1-201ENST00000606707 158 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AC073343.1-201ENST00000328239 651 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 RNU6-83P-201ENST00000384568 112 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 RNU6-592P-201ENST00000411333 103 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 MTND3P9-201ENST00000429526 346 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC-1.26□□□□□ -2.61
SPG11Q96JI7 RNU1-54P-201ENST00000517181 120 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 MIR6717-201ENST00000622747 73 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AL138960.2-201ENST00000625145 535 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 AC019226.2-201ENST00000625973 424 ntBASIC-1.26□□□□□ -2.61
SPG11Q96JI7 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SNORD116-9-201ENST00000384000 95 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SNORD116-3-201ENST00000384287 95 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SNORD116-8-201ENST00000384365 95 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SNORD116-7-201ENST00000384404 95 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SNORD116-5-201ENST00000384462 95 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 RNU6-831P-201ENST00000384548 107 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 RNA5SP494-201ENST00000410653 129 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 RNU6-387P-201ENST00000411331 105 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 RNU6-998P-201ENST00000515894 101 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SNORA25.10-201ENST00000515926 124 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 PIGPP4-201ENST00000584447 307 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 AC005972.2-201ENST00000604690 348 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.27□□□□□ -2.61
SPG11Q96JI7 RNU4-80P-201ENST00000363200 141 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 RNU4-70P-201ENST00000384579 139 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 MIR519E-201ENST00000385075 84 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 SNORA26.4-201ENST00000391188 123 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 MTCO2P16-201ENST00000436962 677 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 AL353691.2-201ENST00000443795 59 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 MTND2P32-201ENST00000521584 1038 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 FRG2DP-202ENST00000566967 323 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 MIR4460-201ENST00000577862 86 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 MIR548AG2-201ENST00000581228 64 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 AL158209.2-201ENST00000619266 216 ntBASIC-1.27□□□□□ -2.61
SPG11Q96JI7 MIR342-201ENST00000362212 99 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AC097635.1-201ENST00000450678 155 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 RNU7-96P-201ENST00000459535 64 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 RNU6-966P-201ENST00000516479 104 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 MIR4464-201ENST00000580818 92 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AC022441.3-201ENST00000605737 136 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AC107905.1-201ENST00000616204 426 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 RNU5B-1-201ENST00000363286 116 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 SNORA18-201ENST00000384416 132 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 SNORD70.1-201ENST00000391007 85 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 RNU6-466P-201ENST00000391224 103 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 MTATP6P20-201ENST00000414147 562 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 RNU6-850P-201ENST00000516934 103 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AC091144.1-201ENST00000519573 138 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AL049861.1-201ENST00000603130 150 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AL133215.3-201ENST00000609801 448 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 MIR1264-201ENST00000616374 69 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AC097460.3-201ENST00000623099 442 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 AL669831.3-213ENST00000636676 183 ntBASIC-1.28□□□□□ -2.61
SPG11Q96JI7 RNY3P11-201ENST00000364153 102 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 RNU6-913P-201ENST00000390913 95 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-1.29□□□□□ -2.62
SPG11Q96JI7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.29□□□□□ -2.62
SPG11Q96JI7 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 RNU6-612P-201ENST00000516909 102 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 RNA5SP26-201ENST00000362406 119 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 AL603914.1-201ENST00000401964 204 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 AC018880.2-201ENST00000414265 201 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 MTATP6P13-201ENST00000438531 667 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 RNU7-149P-201ENST00000516739 59 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
SPG11Q96JI7 AC026741.1-201ENST00000605892 482 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 MIR548AY-201ENST00000617669 107 ntBASIC-1.29□□□□□ -2.62
SPG11Q96JI7 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms