Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU7-156P-201ENST00000517214 74 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 AC124312.5-201ENST00000604451 268 ntBASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.03□□□□□ -2.4
ECHDC3Q96DC8 RNA5SP257-201ENST00000363023 116 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 SNORD114-16-201ENST00000363044 70 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU4-80P-201ENST00000363200 141 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 SNORA36.1-201ENST00000363424 132 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.222-201ENST00000364264 102 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.251-201ENST00000364551 99 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU6-144P-201ENST00000383951 107 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.428-201ENST00000384078 102 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU6-937P-201ENST00000384325 106 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU6-364P-201ENST00000384387 107 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU6-1248P-201ENST00000391096 64 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU6-602P-201ENST00000411155 105 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 AC099654.14-201ENST00000638599 341 ntBASIC0.02□□□□□ -2.41
ECHDC3Q96DC8 MIR30D-201ENST00000362283 70 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 SNORD115-28-201ENST00000363931 81 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 RNU6-899P-201ENST00000363947 107 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.280-201ENST00000364765 112 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 RNY4P36-201ENST00000391116 96 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 MIR1257-201ENST00000408490 117 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 RNU7-152P-201ENST00000458982 64 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 TRBVB-201ENST00000477100 408 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.666-201ENST00000516187 112 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 RNU6-191P-201ENST00000516295 94 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 SNORA40.14-201ENST00000516543 86 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 RNU6-448P-201ENST00000517052 107 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 SNORD116.3-201ENST00000517176 78 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 AC112693.2-201ENST00000556538 232 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.30-201ENST00000362572 97 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 SNORA72.1-201ENST00000363485 129 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.286-201ENST00000364813 102 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 RNU6-21P-201ENST00000384710 107 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 MIR518F-201ENST00000384973 87 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 RNU6-308P-201ENST00000390957 107 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 AL160004.2-201ENST00000432935 350 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 RNU6-277P-201ENST00000516272 106 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.718-201ENST00000517110 102 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 MIR2909-201ENST00000617113 69 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 MTND4LP32-201ENST00000636111 270 ntBASIC0□□□□□ -2.41
ECHDC3Q96DC8 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 SNORD114-9-201ENST00000364370 72 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 MT-TF-201ENST00000387314 71 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 RNA5SP496-201ENST00000391240 109 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 HMGN1P33-201ENST00000432945 451 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 POLR2KP2-201ENST00000438155 177 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 RNU7-53P-201ENST00000516705 60 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 AC133485.4-201ENST00000561835 220 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 SNORD113-5-201ENST00000607261 78 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 AL138825.1-201ENST00000618587 192 ntBASIC-0.01□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU6-302P-201ENST00000365249 107 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 RNA5SP117-201ENST00000365294 118 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU1-115P-201ENST00000365329 160 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 RNY3-201ENST00000365484 102 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 SNORA27-201ENST00000384323 126 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 MIR548A2-201ENST00000384956 97 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU6-876P-201ENST00000391295 104 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 RNU2-59P-201ENST00000410482 191 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 U8.20-201ENST00000459445 131 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 RPS29P24-201ENST00000486345 171 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 SEPT14P8-201ENST00000508026 178 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 SNORD77.4-201ENST00000516158 81 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 AC131281.1-201ENST00000522984 164 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 MIR5190-201ENST00000581537 80 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 SNORD58B-201ENST00000607313 66 ntBASIC-0.02□□□□□ -2.41
ECHDC3Q96DC8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 RNU6-763P-201ENST00000390865 106 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 RNU6-130P-201ENST00000411112 103 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 MTCO1P5-201ENST00000433573 344 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 AC023449.1-201ENST00000454464 154 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 RNU2-31P-201ENST00000516954 155 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 RPS29P30-201ENST00000600975 111 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 AC092447.9-201ENST00000603395 144 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 MIR8066-201ENST00000617280 78 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 AC104985.2-201ENST00000620598 500 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 AL606534.2-204ENST00000635008 178 ntBASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.03□□□□□ -2.41
ECHDC3Q96DC8 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
ECHDC3Q96DC8 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.04□□□□□ -2.42
ECHDC3Q96DC8 RNA5SP214-201ENST00000363378 118 ntBASIC-0.04□□□□□ -2.42
ECHDC3Q96DC8 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.04□□□□□ -2.42
ECHDC3Q96DC8 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.04□□□□□ -2.42
ECHDC3Q96DC8 SNORA1.1-201ENST00000364671 133 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms