Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MIR3671-201ENST00000580455 88 ntBASIC1.7□□□□□ -2.14
CHMP4CQ96CF2 U6.106-201ENST00000636360 105 ntBASIC1.7□□□□□ -2.14
CHMP4CQ96CF2 RNU6-643P-201ENST00000384018 107 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 MIR518F-201ENST00000384973 87 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 AC087499.4-201ENST00000448505 178 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 AC107297.1-201ENST00000459991 176 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 RNU6-165P-201ENST00000517170 99 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 SNORA81.3-201ENST00000517283 198 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 AC007751.1-201ENST00000529260 376 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 MIR548AR-201ENST00000582191 57 ntBASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.69□□□□□ -2.14
CHMP4CQ96CF2 ZNF209P-201ENST00000593450 2304 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.370-201ENST00000365589 108 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 SNORD28B-201ENST00000390993 75 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 AC009474.2-201ENST00000451383 136 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 AC022559.1-201ENST00000520905 205 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 MIR4781-201ENST00000585250 76 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 AL096861.1-201ENST00000610899 123 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 AL157834.3-201ENST00000615543 103 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 AC134878.1-201ENST00000619901 243 ntBASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.68□□□□□ -2.14
CHMP4CQ96CF2 SNORA7.1-201ENST00000363750 139 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.241-201ENST00000364470 117 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 MIR150-201ENST00000385048 84 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 RPS29P23-201ENST00000458635 123 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 RNU6-1219P-201ENST00000516143 112 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 SNORD116-25-201ENST00000516517 92 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 MIR378D2-201ENST00000580636 98 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 AC008133.2-201ENST00000624540 351 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 AL161722.3-201ENST00000605789 2983 ntBASIC1.67□□□□□ -2.14
CHMP4CQ96CF2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.23-201ENST00000362496 106 ntBASIC1.66□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.37-201ENST00000362606 108 ntBASIC1.66□□□□□ -2.14
CHMP4CQ96CF2 RNA5SP48-201ENST00000363969 126 ntBASIC1.66□□□□□ -2.14
CHMP4CQ96CF2 Y_RNA.785-201ENST00000384290 109 ntBASIC1.66□□□□□ -2.14
CHMP4CQ96CF2 MIR548A2-201ENST00000384956 97 ntBASIC1.66□□□□□ -2.14
CHMP4CQ96CF2 AC006461.1-201ENST00000412637 326 ntBASIC1.66□□□□□ -2.14
CHMP4CQ96CF2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
CHMP4CQ96CF2 RNU6-312P-201ENST00000364629 107 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 RNU1-98P-201ENST00000458992 160 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 RNU6-182P-201ENST00000516970 105 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 AP003484.1-201ENST00000530974 250 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 MIR4421-201ENST00000578133 69 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 MIR4431-201ENST00000579990 94 ntBASIC1.65□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-34-201ENST00000362441 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-12-201ENST00000362583 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-29-201ENST00000362834 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-9-201ENST00000362912 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-21-201ENST00000362963 81 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-14-201ENST00000363090 81 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-13-201ENST00000363358 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-41-201ENST00000363608 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-11-201ENST00000363616 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-5-201ENST00000363633 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-39-201ENST00000363694 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-4-201ENST00000363810 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-16-201ENST00000363887 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-6-201ENST00000363942 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-42-201ENST00000364273 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-15-201ENST00000364809 81 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-1-201ENST00000364961 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-26-201ENST00000365067 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-10-201ENST00000365073 81 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-43-201ENST00000365503 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-36-201ENST00000365629 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORA51.10-201ENST00000384418 136 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 MIR758-201ENST00000390227 88 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 RNU6-321P-201ENST00000410912 106 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 RNU7-120P-201ENST00000459334 63 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 RNU7-41P-201ENST00000515917 61 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORA31.2-201ENST00000516019 134 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 RNA5SP61-201ENST00000516453 100 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 RNU6-794P-201ENST00000517261 64 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 MIR3192-201ENST00000584920 77 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 SNORD115-40-201ENST00000606510 82 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 MIR7974-201ENST00000615835 79 ntBASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.64□□□□□ -2.15
CHMP4CQ96CF2 Y_RNA.410-201ENST00000383992 113 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 SNORA70.7-201ENST00000384159 133 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 Y_RNA.542-201ENST00000384641 111 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 MIR570-201ENST00000384917 97 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 AC107027.2-201ENST00000512197 115 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 SNORA31.4-201ENST00000516049 129 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 AC090821.2-201ENST00000523552 176 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 AL359821.1-201ENST00000605519 182 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 MIR4251-201ENST00000635819 61 ntBASIC1.63□□□□□ -2.15
CHMP4CQ96CF2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.62□□□□□ -2.15
CHMP4CQ96CF2 Y_RNA.357-201ENST00000365487 109 ntBASIC1.62□□□□□ -2.15
CHMP4CQ96CF2 RNU6-1189P-201ENST00000383958 107 ntBASIC1.62□□□□□ -2.15
CHMP4CQ96CF2 Y_RNA.521-201ENST00000384560 114 ntBASIC1.62□□□□□ -2.15
CHMP4CQ96CF2 SNORA40.5-201ENST00000391061 128 ntBASIC1.62□□□□□ -2.15
CHMP4CQ96CF2 AF228730.3-201ENST00000436691 102 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 308.5 ms