Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 AC108706.1-201ENST00000611053 297 ntBASIC0.66□□□□□ -2.3
VPS33AQ96AX1 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.65□□□□□ -2.31
VPS33AQ96AX1 RNU6-369P-201ENST00000362515 102 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.37-201ENST00000362606 108 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 RNU6-888P-201ENST00000363010 101 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 RNU6-211P-201ENST00000384047 107 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.494-201ENST00000384432 111 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 MIR548A2-201ENST00000384956 97 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 RNU6-1203P-201ENST00000410703 110 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 RNU2-55P-201ENST00000411146 174 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 SNORA18.4-201ENST00000516440 124 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 AC100767.1-201ENST00000528178 123 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 AP003484.1-201ENST00000530974 250 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.65□□□□□ -2.31
VPS33AQ96AX1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.65□□□□□ -2.31
VPS33AQ96AX1 AL356055.1-201ENST00000602528 446 ntBASIC0.65□□□□□ -2.31
VPS33AQ96AX1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.65□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.229-201ENST00000364347 113 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 RNU6-934P-201ENST00000365154 107 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 SNORA33.2-201ENST00000365413 134 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 SNORA27-201ENST00000384323 126 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 RNU6-1289P-201ENST00000384431 106 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 MIR626-201ENST00000385032 94 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 RNU6-321P-201ENST00000410912 106 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 RNU6-938P-201ENST00000411285 103 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 RNU6-504P-201ENST00000516568 104 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 RNU6-958P-201ENST00000516995 106 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.64□□□□□ -2.31
VPS33AQ96AX1 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 RMST_2.1-201ENST00000617263 136 ntBASIC0.64□□□□□ -2.31
VPS33AQ96AX1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.64□□□□□ -2.31
VPS33AQ96AX1 MIR337-201ENST00000362281 93 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.24-201ENST00000362508 103 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 RNU4-10P-201ENST00000364383 140 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.338-201ENST00000365320 114 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 RNU6-639P-201ENST00000384074 107 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 RNY3P5-201ENST00000384127 102 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 SNORD61-201ENST00000384252 73 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.604-201ENST00000410574 102 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 MTCYBP6-201ENST00000441810 138 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 RPS29P24-201ENST00000486345 171 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 RNU6-1137P-201ENST00000517073 99 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 AC018659.1-201ENST00000551083 169 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 Z97988.1-201ENST00000637697 135 ntBASIC0.63□□□□□ -2.31
VPS33AQ96AX1 SNORD38B-201ENST00000384690 67 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 MIR573-201ENST00000384964 99 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 AC090844.1-201ENST00000422019 156 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 AC244023.1-201ENST00000426884 112 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 MTND5P22-201ENST00000458380 195 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 RNU7-62P-201ENST00000458856 62 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 RNU6-1053P-201ENST00000515930 101 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 SCARNA24.2-201ENST00000516968 130 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 AC242498.1-201ENST00000604134 111 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 MIR8055-201ENST00000610739 97 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 SNORD38B-202ENST00000625943 69 ntBASIC0.62□□□□□ -2.31
VPS33AQ96AX1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.44-201ENST00000362676 108 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 snoU13.21-201ENST00000459368 105 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 RNU6-1299P-201ENST00000516316 100 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 RNU6-977P-201ENST00000516411 103 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.701-201ENST00000516812 110 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.61□□□□□ -2.31
VPS33AQ96AX1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.61□□□□□ -2.31
VPS33AQ96AX1 MIR6835-201ENST00000621552 64 ntBASIC0.61□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.66-201ENST00000362862 102 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.410-201ENST00000383992 113 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 MIR520F-201ENST00000384824 87 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNU6-913P-201ENST00000390913 95 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNU6-177P-201ENST00000411257 104 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 SNORD83.1-201ENST00000411362 77 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 AL603825.1-201ENST00000438481 80 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNU7-96P-201ENST00000459535 64 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNA5SP153-201ENST00000516498 76 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNA5SP102-201ENST00000516865 106 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 RNU6-1270P-201ENST00000517128 108 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 MIR4771-2-201ENST00000577758 74 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 MIR4771-1-201ENST00000582617 74 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 AC044792.1-201ENST00000593294 196 ntBASIC0.6□□□□□ -2.31
VPS33AQ96AX1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
VPS33AQ96AX1 RNU1-93P-201ENST00000364704 169 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 MIR520E-201ENST00000384867 87 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 MIR18B-201ENST00000454574 71 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 SNORD2.1-201ENST00000458762 69 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 TRBVB-201ENST00000477100 408 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 SNORD36C-201ENST00000516733 66 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 AC097639.2-201ENST00000603159 172 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 Z83818.1-201ENST00000603584 150 ntBASIC0.59□□□□□ -2.31
VPS33AQ96AX1 Y_RNA.82-201ENST00000363000 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.92-201ENST00000363043 102 ntBASIC0.58□□□□□ -2.32
VPS33AQ96AX1 Y_RNA.235-201ENST00000364412 102 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms