Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RNU6-326P-201ENST00000365480 107 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA36.2-201ENST00000384004 127 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA24-201ENST00000384096 131 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.587-201ENST00000391210 103 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 MIR548P-201ENST00000408336 84 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-1190P-201ENST00000410811 104 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-651P-201ENST00000411040 105 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD36C-201ENST00000516733 66 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 SCARNA24.2-201ENST00000516968 130 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-1270P-201ENST00000517128 108 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 MIR4771-2-201ENST00000577758 74 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 MIR4724-201ENST00000579485 89 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 MIR4771-1-201ENST00000582617 74 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 MIR3171-201ENST00000584270 74 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 MIR6740-201ENST00000618268 113 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 AC134878.1-201ENST00000619901 243 ntBASIC0.38□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.14-201ENST00000362415 103 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.24-201ENST00000362508 103 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.128-201ENST00000363391 112 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.158-201ENST00000363651 101 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-28-201ENST00000363931 81 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.238-201ENST00000364441 102 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.455-201ENST00000384230 98 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD61-201ENST00000384252 73 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.460-201ENST00000384255 102 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 MIR520F-201ENST00000384824 87 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 MIR520H-201ENST00000385126 88 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 MT-TN-201ENST00000387400 73 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 MTCO2P12-201ENST00000427426 682 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 RNU7-67P-201ENST00000459003 62 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA27.4-201ENST00000516650 95 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.721-201ENST00000517207 102 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 AP003733.2-201ENST00000529409 171 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 AC134503.1-201ENST00000633048 54 ntBASIC0.37□□□□□ -2.35
RTN4IP1Q8WWV3 MIR377-201ENST00000362145 69 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-211P-201ENST00000384047 107 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 RNA5SP496-201ENST00000391240 109 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 MIR1287-201ENST00000408492 90 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 RNA5SP247-201ENST00000411181 105 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 AL138752.1-201ENST00000452964 351 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 SCARNA8-201ENST00000515924 131 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-693P-201ENST00000516134 107 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-1007P-201ENST00000516586 107 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 AP000753.3-201ENST00000604083 169 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 AP000942.4-201ENST00000604811 241 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 AL136317.1-201ENST00000612653 226 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.36□□□□□ -2.35
RTN4IP1Q8WWV3 AC010332.2-201ENST00000613083 1904 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-34-201ENST00000362441 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-12-201ENST00000362583 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-29-201ENST00000362834 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-9-201ENST00000362912 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-21-201ENST00000362963 81 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.91-201ENST00000363042 107 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-14-201ENST00000363090 81 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-13-201ENST00000363358 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-41-201ENST00000363608 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-11-201ENST00000363616 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-5-201ENST00000363633 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-39-201ENST00000363694 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-4-201ENST00000363810 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-16-201ENST00000363887 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-6-201ENST00000363942 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-42-201ENST00000364273 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.229-201ENST00000364347 113 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-15-201ENST00000364809 81 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNU1-133P-201ENST00000364867 167 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-1-201ENST00000364961 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-26-201ENST00000365067 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-10-201ENST00000365073 81 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-43-201ENST00000365503 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORD115-36-201ENST00000365629 82 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.376-201ENST00000365638 108 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-514P-201ENST00000384208 107 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-1289P-201ENST00000384431 106 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 Y_RNA.512-201ENST00000384518 102 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 MIR573-201ENST00000384964 99 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 MT-TT-201ENST00000387460 66 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 SNORA53-201ENST00000391141 249 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 AC098934.3-201ENST00000430450 190 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 AF228730.3-201ENST00000436691 102 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 AC023449.1-201ENST00000454464 154 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNU7-62P-201ENST00000458856 62 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 snoU13.16-201ENST00000459350 104 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNA5SP220-201ENST00000516298 104 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-977P-201ENST00000516411 103 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 RNU6-570P-201ENST00000517051 105 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 MIR4804-201ENST00000581683 73 ntBASIC0.35□□□□□ -2.35
RTN4IP1Q8WWV3 MIR4676-201ENST00000583078 72 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 858.5 ms