Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MIR5701-3-201ENST00000578890 82 ntBASIC-1.05□□□□□ -2.58
RTL9Q8NET4 MIR3672-201ENST00000584290 82 ntBASIC-1.05□□□□□ -2.58
RTL9Q8NET4 MIR5701-1-201ENST00000585138 82 ntBASIC-1.05□□□□□ -2.58
RTL9Q8NET4 MIR5701-2-201ENST00000615634 82 ntBASIC-1.05□□□□□ -2.58
RTL9Q8NET4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.05□□□□□ -2.58
RTL9Q8NET4 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 RNU6-10P-201ENST00000384036 107 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 SNORD77.3-201ENST00000391113 65 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 SNORA26.8-201ENST00000391306 124 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 AC006210.1-201ENST00000424882 111 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 AC108059.2-201ENST00000434626 151 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 SCARNA17-201ENST00000516183 144 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 RNU7-115P-201ENST00000516433 55 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 SNORA25.16-201ENST00000516741 121 ntBASIC-1.06□□□□□ -2.58
RTL9Q8NET4 RNU6-874P-201ENST00000362390 105 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 RNU6-490P-201ENST00000362985 107 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 SNORD115-28-201ENST00000363931 81 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 MIR587-201ENST00000384845 96 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 MIR548I3-201ENST00000408378 149 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 BX276092.1-201ENST00000427368 251 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.07□□□□□ -2.58
RTL9Q8NET4 RNU6-470P-201ENST00000515954 104 ntBASIC-1.07□□□□□ -2.58
RTL9Q8NET4 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 SNORA63.5-201ENST00000363548 123 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 RNU6-648P-201ENST00000410190 107 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 RPL30P15-201ENST00000457129 321 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 SNORA27.4-201ENST00000516650 95 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 MIR4528-201ENST00000577763 90 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 SNORD116-11-201ENST00000383882 92 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 AC096949.1-201ENST00000412047 152 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.08□□□□□ -2.58
RTL9Q8NET4 SNORD11-201ENST00000459124 84 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 SNORA25.13-201ENST00000516395 103 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 AC060780.3-201ENST00000589464 80 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 AC018462.2-201ENST00000605375 395 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 AL080274.1-201ENST00000605565 220 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 AC027449.1-201ENST00000608890 407 ntBASIC-1.08□□□□□ -2.58
RTL9Q8NET4 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 RNU6-47P-201ENST00000383866 107 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 SNORD116-9-201ENST00000384000 95 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 SNORD116-3-201ENST00000384287 95 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 SNORD116-8-201ENST00000384365 95 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 SNORD116-7-201ENST00000384404 95 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 SNORD116-5-201ENST00000384462 95 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 RNU7-104P-201ENST00000459398 79 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 MTND3P7-201ENST00000474435 343 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 RNU6-835P-201ENST00000516974 104 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 AC124312.5-201ENST00000604451 268 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 MIR548AY-201ENST00000617669 107 ntBASIC-1.09□□□□□ -2.58
RTL9Q8NET4 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 RNU4-50P-201ENST00000364361 141 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 RNU6-842P-201ENST00000384269 107 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 Y_RNA.481-201ENST00000384373 102 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 RNU6-938P-201ENST00000411285 103 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.1□□□□□ -2.59
RTL9Q8NET4 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 RNU7-161P-201ENST00000517289 62 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 AC141846.1-201ENST00000568348 142 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 MTATP6P24-201ENST00000576835 677 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 AC073648.5-201ENST00000603502 305 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 MIR6717-201ENST00000622747 73 ntBASIC-1.1□□□□□ -2.59
RTL9Q8NET4 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.11□□□□□ -2.59
RTL9Q8NET4 RNU4-55P-201ENST00000410731 137 ntBASIC-1.11□□□□□ -2.59
RTL9Q8NET4 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.11□□□□□ -2.59
RTL9Q8NET4 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.11□□□□□ -2.59
RTL9Q8NET4 DEFB131E-201ENST00000532329 154 ntBASIC-1.11□□□□□ -2.59
RTL9Q8NET4 AC011373.1-201ENST00000607270 237 ntBASIC-1.11□□□□□ -2.59
RTL9Q8NET4 AC093726.3-201ENST00000637588 150 ntBASIC-1.11□□□□□ -2.59
RTL9Q8NET4 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 RNU5A-2P-201ENST00000384337 116 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 SNORD41.1-201ENST00000391000 69 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 SNX3P1X-201ENST00000414887 175 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 AC023449.1-201ENST00000454464 154 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 RNU7-96P-201ENST00000459535 64 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 RNU1-54P-201ENST00000517181 120 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 MIR2355-201ENST00000517199 87 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 AC005014.2-201ENST00000607795 599 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 Z69908.1-201ENST00000622603 247 ntBASIC-1.12□□□□□ -2.59
RTL9Q8NET4 RNU6-653P-201ENST00000363074 106 ntBASIC-1.13□□□□□ -2.59
RTL9Q8NET4 RNU6-949P-201ENST00000384040 107 ntBASIC-1.13□□□□□ -2.59
RTL9Q8NET4 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.13□□□□□ -2.59
RTL9Q8NET4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
RTL9Q8NET4 AL356055.1-201ENST00000602528 446 ntBASIC-1.13□□□□□ -2.59
RTL9Q8NET4 AC024933.1-201ENST00000608472 348 ntBASIC-1.13□□□□□ -2.59
RTL9Q8NET4 RNU6-626P-201ENST00000363354 107 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 218.3 ms